Vitis vinifera (wine grape): 100245579
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Entry
100245579 CDS
T01084
Name
(RefSeq) RNA-binding protein 208 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100245579
03041 Spliceosome [BR:
vvi03041
]
100245579
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100245579
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100245579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_8
RRM_DEAH11
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
100245579
NCBI-ProteinID:
XP_002283326
LinkDB
All DBs
Position
4:complement(join(2411532..2411846,2413230..2413403,2414062..2414147,2417418..2417537,2417644..2417674,2417981..2418056,2418727..2418814,2418923..2418984,2419323..2419399,2425637..2425739,2426083..2426144,2431286..2431402))
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AA seq
436 aa
AA seq
DB search
MQQRFKQQQQQQQTLMQQALLQQQHMYHPGVLAAAAMSQMEPVPSGNLPPGFDSSSCRSV
YVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGFVDYLDRASASLAIMTLHGRQV
YGQALKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKT
GRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVL
TNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHALGAGVIEEVRIQRD
KGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQILP
TAGINQGYSPAELLAYQRQLALSQAAASSLSGQALMQMTGHHGLAAGSMGVSSGGTQAMY
DGYPNNSSGQQLMYYH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaggtttaagcagcagcagcaacaacaacaaaccctaatgcagcaagcattg
cttcagcagcagcatatgtaccacccgggtgtactcgctgcggctgccatgtctcaaatg
gagcctgttccaagcggcaacctgcctcctggctttgattcatcgtcatgccgcagtgtt
tatgtaggtaatattcatgtaaatgtcactgagaaacttcttgcagaagttttccaaagt
gctggtcctcttgctggatgcaaactcattagaaaggataagtcgtcatatggttttgtg
gactaccttgatcgagcatctgctagtcttgcaataatgacattgcatggacgtcaagtt
tatggtcaagcacttaaggtgaattgggcatatgccagtggccagagggaagacacgtca
gggcactttaatatatttgttggtgatttgagcccagaggttactgacgcaactttatat
gcctgcttctcagtttttgctagttgttcagatgcaagggtcatgtgggatcacaaaact
ggacggtcaaaaggatatggctttgtttctttccgtaatcagcaggatgcacagagtgcc
atcaatgacttgagtggtaaatggcttgggaataggcaaataagatgcaactgggcaact
aaaggtgctggctttaatgaggacaagcaggttaatgaaaatcaaaacgcagttgtactt
actaatggatcttcagatggaagtcaagagaatacaaatgaggaggcccctgaaaataat
ccagcatacactactgtctatgttggcaacctttctcatgaggtaactcaagctgaactt
cactgtcagtttcatgctcttggagctggggttattgaggaagtgcgcatccagagggat
aaaggttttgggtttgtcaggtaccacacccatgaagaagcagccttggccattcagatg
gcgaatggaaggatagttcgtggaaaatccatgaagtgctcatggggtagcaagccaacg
cctctcggtacagcttctaatcccctacctcctccagctcaaccatatcagatccttcct
actgctggcattaaccaaggctactcaccagcagagttgttggcctatcagcgccagctt
gccttaagccaagctgctgcatccagcctctcgggccaagctcttatgcagatgactgga
catcatggtctagctgcaggttccatgggtgtgagctctggtggcacccaagctatgtat
gatggatatcccaataattcatcaggccagcagctgatgtattaccattaa
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integrated database retrieval system
