KEGG   Vitis vinifera (wine grape): 100245663
Entry
100245663         CDS       T01084                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100245663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100245663
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100245663
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 100245663
NCBI-ProteinID: XP_002275112
UniProt: F6HV16
LinkDB
Position
14:join(28192011..28192098,28192180..28192430,28192523..28192692,28192787..28192892,28193516..28193593,28193710..28193763,28194950..28195134,28195338..28196934,28197442..28197636,28198276..28198361,28198658..28198943,28199062..28199198,28199976..28200060,28200621..28201172,28201438..28202109)
AA seq 1513 aa
MGVHGLWELLAPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRENAQAKIRKTAEKLLLNHLKAMRLK
ELAKDLENQRLNNNDKGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLAAEED
GNFVGDAGISNEEDDDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQMREKLMAEN
RQKYQKVKKAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASEANREY
IFSSSFTGDKEALTNGGVEKNGDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASV
FNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQDRTNEDNNGIVTLNKTN
EQSIPDNGASIEISFEDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASD
SDWEEGIIEEKGGSCIDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGN
PASKGRLEEETDLQEAIRRSLEDLGGEKAVGESFKDSDIKEYDEKVHEVKDDAFHKKNDK
AEQDFPLENLPEQNGSFCKIVDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVL
NNELCEEYQKDVGESGNVGRETNEVYMIREQLSHASKKSVDTSTLANSCSGDGSHISDAM
LGNMPDATPADSSKYDSEAAPTWHSNETTDPAIPPGETCIKGKTAVEQKLAEGNNHVNFF
MEKERNMGNSVTEDKKNVQFGVTEDVLEEMMILDQECLNLGDEQRKLERNADCVSSEMFA
ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERK
YVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKF
REWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMDAFDENVSQNEHNESVDD
IQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFSWGKPDLFVLRKLC
LEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQ
TSELLDDAVQEGSKRGKRSKESPSKLDNKQEIPINEIGSTAARNGSNATAKTTPKQSRRR
RIRKPVPSDGESAEPPVQAGQKQCNDTGSSKNGRGKGRKKGRGVRRGRGRSRIQENPGSE
ISGTSSSDCNSGNEEEVPAQKLDGSNEVRRSKRPRKAVNYANDDLEIDDEGKSLDQGNQK
CTNEEAVELEPSRDQIICGDAAADFSGKNQQKAEDSSPGEDLCGDYPETEGVMCMDENEI
GQLDSRDDDPTFADEFSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTIYENPDPESE
LAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCPNATIGLSMPENTGDDTGTNTVKAL
RAMPFLRKKRRLS
NT seq 4542 nt   +upstreamnt  +downstreamnt
atgggagtgcacggtctctgggaacttttggcccctgtcggtcgccgtgtgtctgtcgag
actcttgccggaaaacgactcgccatagatgcgagtatatggatgatacagttcatgaag
gcaatgcgagacgagaaaggagagatggtgaggaacggtcacctgttagggttcttccga
cgcatatgcaagctcctcttcctacgcactaagcccgttttcgttttcgacggcggcacc
cctgccctcaagcgccgcaccgttgtcgctcgtcgccggcagcgagaaaatgctcaggcc
aagattcggaaaactgccgagaaattgctcctcaatcaccttaaggcaatgaggttaaaa
gaattggctaaggatttggagaatcagcggctgaacaacaatgataaggggaaaaaggtt
ttatcatatcaaacggaaacggctggagaggtttctgaaggaaatagttcagtatccggg
acttacaatcaggaaaagctagatgaaatgttggcagcatcccttgcggcagaggaagat
gggaattttgtaggagatgcagggatttctaatgaagaagatgatgatgatgatgaagat
gaagagatgatgcttccaattatgaatggaaaagtcgatccagctgtattagctgcattg
cctccatcaatgcagcttgatcttcttgtgcagatgagagagaaattgatggcagaaaac
agacaaaaatatcaaaaagtgaaaaaggcccccgcagaattttcagagttacaaatacag
gcttatcttaaaaccgttgctttccgtcgggagatagatgaagtgcagaaatctgctgct
gggaggggggtaggtggtgtgcagacttcacggatagcctctgaagccaatagagaatat
attttctcctcatcatttactggtgataaagaagcacttacaaatggtggagtagagaaa
aatggagataagcaatatcagataccaacagagtgtcctccagattccccaaataatgtt
gcatctaccagtaagtccaatactgccgcagaatcagttgcaggtgaacctgcaagtgtt
tttaatgatgatgttgagacatacctggatgagcgggggcgtgtccgagttagtagggta
agagctatgggaattcgtatgacccgagatctacaaaggaatttggatttgatgaaagag
attgagcaggatagaactaatgaggataataacggaattgttacattaaacaaaacaaat
gagcagtctatccctgacaatggggcttctatagagatatccttcgaagatgatggtgag
cacaactgtttaaatggtgatgacgaattatttgctagtttggtagcaggaaatccagtg
ataatttcttcttctgatgctgctctctcaaacagacgaccagctgattctgcttcagat
tctgactgggaggagggaatcattgaagagaaaggtggtagctgtattgacaatgttgga
gtggaaattaaaccatctgttatggaagaaagagttagtgatgatagtgaagtggaatgg
gaggaaggaccttgtgatgtttcaaaaaatgtgtcagcatgcccatctaagtttggaaat
cctgcttccaaaggaagattggaagaagaaactgatctccaggaagcaataaggagaagt
cttgaagatttaggtggtgagaaagctgttggtgaatcatttaaagattcggatattaag
gaatatgatgaaaaggttcatgaagttaaagatgatgcatttcataaaaaaaatgataag
gctgaacaagattttccattggaaaatttaccagagcaaaatggatcattttgtaaaatt
gtggatgtagttgagaaacttgatagtgtggatggaatgaacacctcacagagcattgat
gcatcagggagacagttgacatcattgctggaagacaatcctcataagatggaagtactg
aataatgaactgtgtgaagaataccagaaagatgttggtgaaagtggaaatgtgggaaga
gaaacaaatgaggtctatatgattagggagcagctctctcatgcctcaaagaagagtgtt
gatacatctactttggctaacagttgttcgggagatggttcacatatttctgatgcaatg
ttgggtaacatgcctgacgccactcctgctgattcaagcaagtatgattctgaagctgca
ccaacatggcattcaaatgagacaactgaccctgccattcctccaggagaaacttgtata
aaaggaaaaactgctgttgagcaaaaattggctgaaggaaataatcatgttaattttttc
atggaaaaagagcggaacatgggtaattctgtaactgaggacaaaaaaaatgttcagttt
ggagttactgaggatgttttggaggaaatgatgatccttgatcaggaatgcttaaatttg
ggagatgaacagaggaagcttgaaagaaatgctgattgtgtcagcagtgagatgtttgca
gagtgccaggaacttctccaaatgtttggcttaccatatattattgcacctatggaagct
gaagctcaatgtgcttatatggaacttgcaaaccttgttgatggagttgtaacagatgat
tcagatgtattcttgtttggagcacgaagtgtttacaagaatatatttgacgaacgcaaa
tatgttgagacctattttatgaaggacattgagactgagcttggattaaatagagaaaaa
gtaattcgcatggcactccttcttgggagtgattatactgagggtgttagtggaattggc
attgttaatgctattgaagttttaaattcttttcctgaggaggacggtcttcataagttc
cgggagtgggttgaatcaccagatccaaacatcctaggaaaggttaatgttgaaactgga
tccagttcaaggaaacgaggatccaaggttggaagtggcgaccagagtcactcaaaaaac
aatatggatgcatttgatgaaaatgtttcccaaaacgagcacaatgagtctgttgatgac
attcaatctggaaagcagatcttcatggataagcacagaaatgtgagcaagaactggcac
attccttcttcttttccaagtgaaacagttatctctgcatatgcctctccccaagtggac
cagtcaacagagcctttctcgtggggaaaaccagatctttttgttcttcgcaaattgtgt
ttggaaaagtttggttggggtaaccagaaggctgatgagttgctactacctgttttgaaa
gagtacaacaaacatgagactcaattgcggttggaagcattttacactttcaatgagaga
tttgccaaaattcgtagtaagagaatcaaaaaggctgttaaaggaattaccgggagtcaa
acctcagagttgttggatgatgctgtgcaagaaggttctaaacgtggaaagagaagcaaa
gagagtcctagtaaacttgacaacaaacaagaaattcctataaatgaaatagggagtact
gctgctagaaatgggagcaatgctacagcaaaaacaactccaaagcagtcaagaagaaga
aggatccgtaagcctgttccatctgatggagagagtgcagaacctcctgtgcaggcagga
cagaagcaatgcaacgatacaggatcaagcaagaatggaagaggtaaaggaagaaagaaa
ggccggggagtcagaaggggaagaggaagaagtaggatacaagaaaatcctggctctgaa
attagtggaaccagctccagtgactgtaacagtggcaatgaggaggaagttccagctcaa
aagttggacgggtcaaatgaagtgcgaaggtcaaaacgtcctcggaaggctgtgaattat
gctaatgatgacttagaaattgatgacgagggcaagtcattagaccaaggcaaccaaaag
tgcaccaatgaggaggcagtggagcttgagccatctagagatcagattatatgtggagat
gctgctgctgatttcagtggaaagaaccaacaaaaagctgaagattcttcacctggagaa
gacttgtgtggagactacccagaaacagaaggtgtcatgtgcatggatgaaaatgaaata
ggtcagttagattcaagagatgatgatcccacttttgcggatgaattttctgaagattac
cttaaaatgggaggtggattttgtgtggaagaagatgagaaagataaggaccacaatgct
cgcacatatgacccagctaaagcagacaccatctatgaaaatcctgatcctgaatctgaa
ctcgctattcatccagctgaatcagtctcaagcctgcaaaatactgcagggggatttcaa
tctgaaccaacatgtcaacctgatactgaactgaatctggactgtccaaatgcaacaatt
gggctgtctatgccggagaacacgggagacgacactggaacaaacactgtaaaagctctt
cgtgctatgcctttcttaagaaaaaagcgaaggttgagttga

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