Vitis vinifera (wine grape): 100245990
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Entry
100245990 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100245990
KO
K08497
protein transport protein SEC20
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100245990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100245990
Membrane trafficking [BR:
vvi04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
100245990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec20
DUF4407
Motif
Other DBs
NCBI-GeneID:
100245990
NCBI-ProteinID:
XP_003632010
UniProt:
A0ABY9BXX7
D7SZQ1
LinkDB
All DBs
Position
5:join(9948041..9948315,9948657..9948726,9948949..9949004,9949128..9949203,9949332..9949368,9957350..9957464,9957540..9957780)
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AA seq
289 aa
AA seq
DB search
MDKVTEAVEKAKKDWEETYGKTLDHIKAIEDYGKSSDQKNSLPRLNGLAQDGLALLSSLQ
FNLDLLAPQLPTDEDIQSANTTLQSWKNQIQSLRSSLRNANLQAKANMRKAAKEERELLL
GAGGESTIRRRNLQTKTGMTSAAENITESLRRTRQLMVQEVERNTTMLLTNEESTGVLKK
AESEYKGHRSLLMRTRNLLTTMQRQDVLDRIILIVGFVFFSCAVLYVVSKRIGLLKLQRT
VTAAIKAGMVRQANIGQDAAEDGINLAPVHDNAIRRVEVPLEQHMHDEL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtcacagaagccgtggagaaggcgaagaaggattgggaagagacgtatgga
aaaaccctagatcacataaaggcaattgaggattatggaaaatcatccgatcagaagaac
tcacttcctagattgaatggccttgctcaagacggtttggctttgctctcatcgttgcag
ttcaatcttgatcttctcgctccacagctgcccactgatgaagacattcaatctgctaac
accacacttcaatcttggaagaatcaaattcaaagtttgcgttcgagtttgaggaatgcg
aatttacaagcaaaagcaaacatgaggaaagcagctaaggaagagagggaacttcttctg
ggggctggaggagagtccacgattcgcagacgcaatttacagacaaagactggaatgaca
tctgctgctgaaaatatcacagagagccttcgccgaactcgccagcttatggttcaggag
gtcgaaagaaacacaaccatgctcttgactaatgaggagtcaacaggagtattaaaaaag
gctgaaagtgaatataagggacaccgctcactgctcatgcgaaccagaaacctactaaca
acaatgcaacgtcaagatgtccttgacaggatcatcctcattgttggctttgtcttcttc
tcttgtgctgttctctacgttgtttcaaagcgtattggcctactcaagttgcaaagaacg
gttactgctgcaataaaggctgggatggtgagacaagcaaacattggacaggatgctgct
gaagatggcataaatcttgctcctgtccatgacaacgcaattcgcagagtagaggtgcca
ttggaacaacatatgcacgatgaactttga
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