Vitis vinifera (wine grape): 100246002
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Entry
100246002 CDS
T01084
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein isoform X2
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03010
Ribosome
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
100246002
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100246002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vvi03011
]
100246002
04121 Ubiquitin system [BR:
vvi04121
]
100246002
Ribosome [BR:
vvi03011
]
Ribosomal proteins
Eukaryotes
Large subunit
100246002
Archaea
100246002
Ubiquitin system [BR:
vvi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
100246002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
zf-C4pol
TBK1_ULD
Ubiquitin_5
Plexin_RBD
Dsc3_N
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100246002
NCBI-ProteinID:
XP_010654111
UniProt:
A5AZI0
A0A438EK59
LinkDB
All DBs
Position
8:join(18259341..18259443,18259690..18259776,18259874..18259976,18260807..18260873,18261155..18261181)
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaacggggaagacgataaccctagaggtagagagcagt
gacaccattgacaacgtcaaagcgaagattcaggacaaggaaggaatcccaccggatcag
cagcgattgatcttcgccggaaagcagcttgaagatggacgaactcttgctgactacaac
atccagaaagaatccactcttcatcttgtgctgaggcttcgtggagggattatagagccg
tctctgatggctttggcacgcaaatacaatcaagacaagatgatttgccgcaaatgttac
gctcgccttcatccaagggctgtaaactgtcggaagaagaaatgcggccatagcaatcag
ctgaggcctaagaagaagatcaagtga
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integrated database retrieval system
