KEGG   Vitis vinifera (wine grape): 100246013
Entry
100246013         CDS       T01084                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100246013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100246013
   03041 Spliceosome [BR:vvi03041]
    100246013
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100246013
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100246013
Spliceosome [BR:vvi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100246013
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 Ntox35
Other DBs
NCBI-GeneID: 100246013
NCBI-ProteinID: XP_002277226
UniProt: A0A438E132
LinkDB
Position
18:complement(join(28547991..28548506,28548789..28548958,28549130..28549229,28550651..28550814,28551661..28551701,28552239..28552294))
AA seq 348 aa
MGSKLKGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPR
GFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTE
DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEI
KKAEPKKASNPPHVSAFGSNSRARSFSDGFGGFGSSYGSYDSGFGAAPYRAAGGLGSRLG
GYGGYGSDGGEYGGGYGSFGSSNLGGYRGDPSLGYSSRFGPYGGGFSGSYGGSGLGGYGQ
GGESYGNYGGSGYASGYDSGAGASYGGAGGLYGRGGYSGSSRYHPYAR
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgggttcgaaattgaagggcaatactactcacacaggcgatggtgctagtcctgggaag
attttcattggaggattggcgaaggatacaacctacgctgccttcaataagcactttgag
aaatatggagaaataacagactcggtgattatgaaagatcggtatactggtcaacccagg
ggatttgggtttgtcacctatgctgatccttcagttgttgacagtgtcattgaagataca
catgttattaacggaaaacaggttgagattaaaagaaccattccaaaaggctctggtcaa
tcgaaggatttcaaaacaaagaagatatttgttggtggattaccatctacagtcactgaa
gatgagttcaaggatttcttctccaagtatgggaaggtggaggagcaccagattatacgc
gaccatgaaaccaaccgttcgcgaggctttggatttataatatttgaaagtgaagaggta
gtagatgaaatattgtcggaggggaatatgattgatatggcaggcactcaggtggagatc
aagaaagctgaaccaaagaaagcctcaaacccaccacatgtttccgcatttggtagcaac
tctagggctcgttctttcagtgatggctttggtggatttggcagctcatacgggagttat
gacagtgggtttggagctgctccatatagggcagctggaggtctgggcagtaggcttggt
ggatacggtgggtatggtagtgatggtggggagtatggtggtggttatggtagttttgga
agcagtaacttaggaggttacagaggggatccttcccttggttattctagtcgctttgga
ccctatggcggcgggtttagcgggagttatggtggaagtggtttaggtggatatggccaa
ggaggcgaaagctacggaaattatggaggttcaggctatgctagtggttatgattctggt
gctggtgctagttatggtggagcaggcggtctgtatggaaggggaggttatagtggcagt
agtcggtaccatccttatgcaaggtag

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