Vitis vinifera (wine grape): 100246359
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Entry
100246359 CDS
T01084
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100246359
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100246359
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100246359
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
COBRA1
zf-C3H2C3
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100246359
NCBI-ProteinID:
XP_002269731
LinkDB
All DBs
Position
18:complement(join(25836040..25836614,25847498..25847902,25859518..25859748,25860557..25860686))
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AA seq
446 aa
AA seq
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MRSMNLVLLFCAFLNLMASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAE
PLDACSPLTNAVEKVEGASSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVA
MAGNSAGIKIHAVFVSKASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSA
VLATCFFVRRHRIRRQRPRVSRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLE
DYNVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGDPPSESTPLLSSSPG
SLAPSSLVSSVRSSLASSSAIHIAPSPSPSHSLSVSRNNSLSATPYIQQSLQSYRQSSLS
VSRSSLDLRNASSQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSSSR
PPHPLHYSESATSFSPYTSAQSLPEC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcaatgaatctagtcctcctcttttgcgcttttctgaatctaatggcttctgtg
gccttcgccaatgtggttctcattgggaacaacgtaactctctctttcgacgacatccaa
gctaacttcgctaaaccagttaaagggtcgggagaatgcgggatattatatgtggcagag
cctctagatgcatgttcacctttgactaatgcagtggagaaggttgagggtgctagttca
ccatttgtattaattgttagaggagggtgtggctttgaggataaagtgagaaacgcccaa
aaagcagggttcgcagctgctattgtatatgataatgaagatggtggtgttttggttgca
atggctggaaattctgctggaataaaaatacatgctgtctttgtttccaaagcttcaggc
atggtactccaaacgtatgctggttctcctgacatggagctgtggataattccaagcttt
gaaaattcagcatggtcaatcatggctatttcttttatttccctacttgccatgtctgca
gtgctggctacttgtttcttcgtccgcaggcatcgcataaggcgacaacgacctagagtt
tctcgtgtccgggaattccatgggatgagcagtcgcttagtgaaggcaatgccgagcctt
atttttacaactgttttagaggataattgtacttcaagaacatgtgccatatgccttgaa
gactataatgttggagagaagctcagaattctgccttgtcgtcacaagtttcatgctttt
tgtgtggactcttggcttacgtcatggagaaccttttgccctgtttgcaagcgcgatgca
agaacaagcacaggtgatcccccatcagaaagcacacctttgctttcttccagcccaggc
tctttggctccctcttctctggtgtcatctgtaagatcatctctagcctcatcctcagca
attcatatagctccatcaccatcaccatcacattccctctcagtttctcggaacaactcc
ctgtccgccactccttacatccagcagtcccttcagtcttaccgccaatcttctttaagt
gtaagccgaagctcactagaccttaggaatgcgtcttcccaaagatctcatgcttcctat
ttggtttcacctcattctatgggttacccatcattatcacctcttaactcaagatacctg
tccccatacattccaagcccaagcaacgcctcactgagttatgttggctcatctagtcga
ccgccacacccactgcattatagcgagtcagctacaagtttttctccttacacttctgct
caatctctcccggaatgttga
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