Vitis vinifera (wine grape): 100246386
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Entry
100246386 CDS
T01084
Name
(RefSeq) KH domain-containing protein At5g56140
KO
K14945
protein quaking
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100246386
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100246386
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Qua1
Motif
Other DBs
NCBI-GeneID:
100246386
NCBI-ProteinID:
XP_002274648
UniProt:
D7UAP0
LinkDB
All DBs
Position
19:complement(join(9433133..9433282,9433403..9433546,9434088..9434204,9434328..9434438,9435369..9435514,9437679..9437764,9439427..9439536))
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AA seq
287 aa
AA seq
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MSSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY
RLLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGGANVNGWASPFQSEMSGLSA
AQNWLGSQGSSSGLIVKRTIRVDIPVEKFPSYNFVGRLLGPRGNSLKRMEATTECRVLIR
GRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDE
SQDFFKKQQLRELAMLNGTLREEGSHMSGSVSPFHNSLGMKRAKTRG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggcaggtacatggcttactctccttctccctctaccgctccccactccccg
cacatcgccggcctccgctccgccacctctgctcttgtagagcaagagaaatatctttct
gagttactggcagagcggcacaagctaagtccatttatgcctgtcctcccacatagctac
cggttgttgaaccaggaaatattgcgtgtaaccacactgttggggaatgcatcaatttta
gatcaaagtgggcttgaacatgctagccccctcgcttctggaggaatattttcaaatgga
ggagccaatgtgaacggatgggcatcaccatttcaatcagaaatgtcaggtttatcagca
gcacaaaactggctaggttctcaaggtagctcatctggtcttattgtgaagagaacaatc
agggtggatattcctgttgagaaatttcctagttacaactttgttgggcgtctccttggt
cctaggggaaactctctaaagaggatggaagcaactactgagtgtcgtgttttaatcaga
ggtcgtggcagcatcaaggacccggctagggaagaaatgatgcgaggaaaaccaggctat
gagcatctgaatgaacctcttcacatacttgtggaagcggaattgccagttgagatagtg
gatgctcgcctgatgcaagcgcgtgaaatactcgaagatttgctaaagcctgtggatgaa
tctcaggatttctttaagaagcagcaactgcgagagctagcaatgctcaatggcacactt
cgtgaggaaggctctcacatgtccggttctgtgtccccctttcacaacagcctaggcatg
aagagggccaagaccagggggtga
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