Vitis vinifera (wine grape): 100246457
Help
Entry
100246457 CDS
T01084
Name
(RefSeq) chlorophyll A-b binding protein CP26, chloroplastic
KO
K08916
light-harvesting complex II chlorophyll a/b binding protein 5
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00196
Photosynthesis - antenna proteins
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
100246457
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
vvi00194
]
100246457
Photosynthesis proteins [BR:
vvi00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
100246457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
100246457
NCBI-ProteinID:
XP_002264295
UniProt:
A5B523
LinkDB
All DBs
Position
18:complement(join(36382336..36382596,36383180..36383314,36383640..36383760,36383892..36383942,36384059..36384143,36384402..36384621))
Genome browser
AA seq
290 aa
AA seq
DB search
MASLAATTAASSLGVSEMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPA
PVSPADEELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKY
QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN
LIFAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGR
LAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctcgctgccaccaccgccgcctcctccctcggcgtctccgagatgctcggt
aaccctctcaacttctccggcgcctccagaactgctccctccgcctccagccccgccacc
tttaagaccgtcgccctcttctccaagaagaaggctgcgccagccaaggccaagcccgcc
cccgtttcacccgccgacgaggagctcgccaagtggtacggtccggacaggaggattttc
ttgccagagggtctgttggacagatcagaaatccctgcgtacttgaccggagaggttccc
ggagattatggttatgatccttttgggctcagcaagaagccagaggacttcgccaaatat
caagcatatgaactgatccacgcccggtgggctatgctcggcgcagctggcttcatcatc
cctgaggccttcaacaaattcggtgccaactgcggccctgaagctgtgtggttcaagaca
ggagctttactccttgatgggaacacactgaattacttcggaaagaacatccccattaac
cttatttttgctgtcgtcgctgaggttgttcttgttggtggtgctgagtactacagaata
atcaatggcttggatttggaggacaagcttcacccaggtggtccttttgatcctctgggg
cttgcaaatgacccagaccaggctgcactgcttaaggtgaaggagattaagaatggtaga
ctggcgatgtttgccatgcttggcttcttcatccaagcttacgttacaggagaaggccct
gttgagaaccttgcagcccatctgagcgacccattcggaaacaacttgctcactgttatc
gctggaactgctgaaagagctcctaccctgtaa
DBGET
integrated database retrieval system
