Vitis vinifera (wine grape): 100246839
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Entry
100246839 CDS
T01084
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100246839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100246839
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100246839
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100246839
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_TRAF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
100246839
NCBI-ProteinID:
XP_019081239
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All DBs
Position
15:complement(join(20360973..20361320,20361528..>20361987))
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AA seq
269 aa
AA seq
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IISSCPSWKPKIFYFWLSFETKLPFLQCHNGHTLCSSCKARALNKCLSCMQQLGNIRCLA
LEKMGMSLELHCKYEEFGCPEIIPYYTKCIHEXLCNFRPYSCPXSGWECSVVXDIPFLVS
HLTDYHKADMICEFKCRFLIADVNEEETCTWMVKIINCYGKYFCVHTEAFFQASTPICVV
FLSLTGNHAEACNYSCSLEIGGNGRKLTFEGIPRSIRESERSLESADSLIVLGSMVHSLG
GETREPKLEITCRIRKSQIPMCACVDKTG
NT seq
808 nt
NT seq
+upstream
nt +downstream
nt
ataatatcttcttgcccatcttggaaacccaaaatcttttatttttggttgagctttgaa
acaaagctcccattcctgcagtgccacaatggacacacactctgttcaagctgcaaagca
agggcactcaacaaatgtctcagttgtatgcagcagctcggtaatataaggtgtcttgca
ctggagaagatgggcatgtcacttgaactgcattgcaagtatgaggagtttggatgccct
gagatcatcccttactacaccaagtgcatacatgaagactgtgtaacttccggccataca
gctgtccatgatctggatgggagtgctctgttgttgggatattccattccttgtttctca
cctgacagattatcacaaggcagacatgatctgtgagttcaaatgtcgatttttaattgc
tgatgtcaatgaagaagaaacctgcacatggatggtaaaaatcatcaattgttatggcaa
atacttttgtgttcatactgaagccttctttcaagcgtcgactcccatttgcgtggtatt
cctcagcctgacaggcaaccatgcagaggcctgcaactacagctgcagcctggagatagg
gggaaatgggcggaagcttacttttgagggcatcccacgaagcattagagagagtgagag
gagtttggagagtgcggacagtctcattgtgctgggaagcatggtgcattccttaggagg
ggagacgagagagccaaaacttgaaattacatgtcggatacggaaatcccagattccaat
gtgtgcatgtgtggataaaaccggttga
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