Vitis vinifera (wine grape): 100246880
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Entry
100246880 CDS
T01084
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vvi01002
]
100246880
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100246880
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100246880
Peptidases and inhibitors [BR:
vvi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100246880
Ubiquitin system [BR:
vvi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100246880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100246880
NCBI-ProteinID:
XP_002283705
LinkDB
All DBs
Position
19:complement(join(233403..233562,233966..234059,234689..235373,235451..235537,235611..236282,236857..236982,237956..238282,238491..238663,239651..239761,240702..240816,241670..241987))
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AA seq
955 aa
AA seq
DB search
MAEALISNPEANTQENGPYSASPDPSSTGSFFHRRIEFHLARKPFSGFTNGGGGFRLETL
NPTTDPKRPGHSTGPAASSGKKQDGSDHVENGLDPELSIGITFRRIGAGLENLGNTCYLN
SVLQCLTYTEPLAAYLQSGKHQNSCRIAGFCALCAIQKHVSRALQSTGRILVPKDLVSNL
RCISRNFRNARQEDAHEYMVHLLETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQV
KCMQCSYCSNKFDPFLDLSLEIFKADSLHKALVHFTATEQLDGGERQYQCQRCKQKVKAL
KQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFVSGSYEENLKYTLYGVL
VHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVRDRKNFTPKK
SIDVVQKQNLVVSAIAKKTCSSISQGIKETIQNRPVEKSLSGAIASAAVTTNDVSNVGLS
KEILSKEASAPKSSRFSSECLALKNGPMSEPPPNVALSKQRVKEPSVLNPTLEKSMPPSA
PSVKGSGITNLDNAVAASTGAKFNVRSEDEISKKDQGILDVIQANCLGSHNSAADKPDSE
KTSPKAIGNSIPFAVGIISNANGTLEKIEPVKFPNGPGGESFQVGSIPKGSAAGDLLIEN
VDDGGQKLSTKSVEFSSPPSMMNGSIHMKTLDCKPHRKLKKKHMKRSMHLVSNNLFRASL
SLRKKKKQRRSKRHTSDIKNLTQERLLEAGCLSIDQGPSTSDKTQTISVGPTNPQGKRVK
HGTKKGDKRTAGKDVKTSNSECLMDTMDMEIRDRIGQEGAMLATDKEPQKSSSSVAKQWD
AQGSDSLNDSKRDRMQNGLMSMLTRGLDKTIVARWDEIEWPSNRVMESRSVEGVTIGYVP
DEWDEEYDRGKRKKVRSSKGSFGEPNPFQEIATKKAHFKKAKMDRSSSRNQPLRM
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgctgatctccaacccggaagccaatactcaggaaaatggtccctactcg
gcttcgccggacccgtcttcaactgggtccttcttccacagaagaatcgagtttcatctc
gcaagaaagcctttctccggcttcactaacggcggcggaggttttcgactagagactctg
aaccccaccaccgatccgaagcggcccgggcacagtacgggtccggcggcttcgagtggg
aagaagcaagatgggtctgatcatgtggagaacgggttggatccggagctcagtattggg
atcacatttaggagaattggtgctggtttggaaaatctgggaaatacctgttatcttaat
tcagtattgcaatgcctgacttatacagagcctttagcagcatatttgcaaagtggaaag
catcaaaattcttgtcgtattgctggattttgtgctttatgtgctatccagaagcatgtc
agccgtgctcttcagtcaactggaagaatattagtacccaaggatcttgtctctaactta
cggtgcatatctcgtaacttcagaaatgcaagacaggaggatgcacatgagtatatggta
catttgcttgaaacaatgcacaaatgttgcttaccttcaggtgtgccaagtgaatcccct
agtgcttatgagaaaagtttggtgcacaagatctttggtggtctccttcgtagtcaggtg
aaatgcatgcagtgctcctactgctccaacaaatttgatccatttctagatttgagtctt
gaaatattcaaagcagattccttgcataaggcccttgtgcacttcacagcaacagaacaa
ttagatggtggtgagagacagtaccaatgtcagcggtgcaaacagaaagttaaggctctt
aaacagctcacagttcacaaggcaccttatgttctgaccatccatctaaagcggtttggt
gcacatgatcctggacaaaagattgacaagaaagttcattttggtcctacaatggactta
aaaccttttgtcagtggttcctatgaagaaaatttgaagtatactctttatggggttttg
gtccatgccggttggagcacccattccggccactactactgctttgttcgcacttcaact
ggcatgtggtactcccttgatgacaatcgggttgtccaggttagtgagaggactgttttg
gatcagaaggcctacatgttgttttatgttcgtgatagaaaaaacttcactccaaagaaa
tccattgatgttgttcagaaacaaaacttggttgtgagtgccatagcaaagaaaacatgt
tccagtataagtcaaggtataaaggaaaccattcaaaatcgaccagtcgagaaaagttta
agtggtgccattgcttctgctgctgtaaccacaaatgatgtatctaatgttggcttgtca
aaggagattctatcaaaagaagcatcagctccaaaaagtagcaggttctcatctgaatgc
ttggcattgaaaaatggtcccatgtctgaacctccacctaatgtagcattatcaaaacag
cgagtgaaggagccttctgttctgaaccctactctggagaaatccatgccaccatcagct
ccatctgttaagggaagtggtatcaccaatcttgacaatgctgttgcagcttcaactggt
gccaaatttaatgtgcgcagtgaggatgaaatttctaagaaagatcagggcatcttagat
gtcatacaagccaactgcctcggttcccataattctgctgccgataagcctgactcagag
aagacctctccgaaggcaattggaaattccattccctttgcggttggtattatttcaaat
gcaaatggaacattggagaaaatagaacctgttaagtttccaaatggtccaggtggtgaa
agttttcaggttggtagtatacccaaagggagtgctgctggtgatttacttattgaaaac
gttgatgatggtggccagaaattatcaaccaagtcagtagaattttctagcccgccaagc
atgatgaatggatctatccacatgaaaacacttgattgcaagcctcacagaaaactaaaa
aagaagcacatgaagagaagcatgcatcttgtctcaaacaacctcttccgagcatccttg
agcctgcgaaagaagaaaaagcagagaaggagcaaacggcacacttctgacatcaagaat
ctcactcaagaacgcttactggaagcaggttgtttatctattgatcagggcccatccaca
tctgataaaacccagacaatttctgtgggtccaactaatcctcagggaaaaagggttaag
catggtaccaaaaagggagataagagaactgctgggaaggatgtaaaaacctctaatagt
gaatgtctgatggataccatggatatggagatcagagacagaattggtcaggagggagca
atgcttgcaacagataaagaaccacaaaagagctctagctcagttgcaaaacagtgggat
gcacaaggttctgatagtttaaatgatagtaagagagatcggatgcagaatggattgatg
agtatgcttaccagaggtctagacaagacaattgttgctcggtgggacgagatagaatgg
ccttcaaaccgggttatggaatcaagaagtgtggagggtgtaaccatcggttatgtacca
gatgaatgggacgaagaatatgatcggggcaagagaaagaaagtaaggagctccaaaggt
agctttggtgaacctaatccttttcaagaaattgcgaccaagaaggcacattttaaaaag
gcaaagatggatcggtccagctccagaaaccaaccactcaggatgtga
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integrated database retrieval system
