KEGG   Vitis vinifera (wine grape): 100247070
Entry
100247070         CDS       T01084                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100247070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100247070
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100247070
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA FHA_2
Other DBs
NCBI-GeneID: 100247070
NCBI-ProteinID: XP_010655352
UniProt: E0CVK9 A0ABY9CP52
LinkDB
Position
10:join(352115..352129,352220..352399,352477..352740,353011..353241,353624..353684,354083..354159,354324..354581,355458..355547,356445..356579,359006..359155,360195..360298,360858..360911,361040..361130,362056..362133,362230..362380,362461..362558)
AA seq 678 aa
MSLSQIGFLVPLNRNLEEDTSTPKLPIPTGANVIGRNSISVSDKRLSRKHLTLIASGNGS
VDAVVEGTNPVVVASGNQRKKLRTGEKAVITNDDIIELIPGHYFFKYVTVAGEKCEKKGN
SMDAQNMESNEVSLSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQASTA
SIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIAVLSN
YMVDIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGTHHSK
AMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLIDYLSV
LKWPEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKLCSVL
QECIFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPLGLGKPLIIWPTVE
DVRCSLEGYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNGQNLA
WFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSKNKCG
LSENTKSQRTKLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRYYKKD
VCGQVWPRHVQLYSSPDS
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgtctctatctcagattggattcttggttccactcaatcgcaatctagaagaagacact
tcaaccccaaaattacccattcccactggcgccaatgtcatcggccggaatagcatctcc
gtctccgacaagaggctgagccgcaagcatctcaccttaatcgcctccggaaatggttcc
gtcgatgccgtcgtggaggggacgaacccagttgttgtggcatctgggaatcaaaggaag
aagctgcgaactggggagaaagcggtaattaccaatgatgatattatagagttgatccct
ggacattacttctttaagtatgtaacagtggctggtgagaaatgtgagaaaaaagggaat
tccatggatgcacagaatatggaatcaaatgaagtcagtctaagtcggaagcgaatgcga
caagtatctgaggacgaggcttttgcaaggaaattacaggctgagatggaaaatgatgtc
cttgtacaggagaggtctttggtgaccggaaagtctggctactcgcaggctagtacagca
agtattccatcttcccacatgaactcagaggccattcgtcattttagtattcctaaagat
aatttacctttaacctatcggcttttgcgagtgaaagatctgcctgcatgggcaaataca
tcttctgtttctataagggatgtaattcagggggatgtgctcattgctgttctttcaaac
tacatggtggacatcgattggttgttatcttcttgtccaacacttgctaaaatccctcat
gtgttggttattcatggagagggtgatggtacgttggatcacatgaagaagaacaaacct
ccgaattggattctgcacaaaccgccactaccaatttcatttggaacgcaccattcgaag
gccatgcttcttgtctatcctcgaggagtgagagttattgtacatacagcaaatttaata
tatgttgactggaacaacaaaagccaaggtttatggatgcaagatttcccttggaaggtc
caaaaagaactgagtaaaggatgtgcatttgaaaatgatctgattgattatctgagtgta
ttgaagtggccagaattcaccgctaatttaccagctcttggcagcttcaatatcaattca
tcctttttcaagaaattcgattacagcaatgcagtggtcagactaattgcatctgtccct
ggttatcacacgggttccaatctgaaaaagtggggacatatgaagctctgcagtgttcta
caggagtgtatttttgacaaagagtttcagaaatctccccttgcttatcagttctcttcc
cttggttctttggacgagaagtggatgactgaactagcatcctcaatgtcatcaggttcc
tgtgatgataaaacacctcttggtttaggcaaacccctcataatatggcctaccgtggaa
gatgtcagatgctctttggagggttatgcagctggaaatgcaattccaagtccacaaaaa
aatgtggagaaagaattcttgaagaagtattgggcaaaatggaaggcaacccacactggt
cgctgtcgtgcaatgcctcatataaagacgtacacccgttataatggtcaaaaccttgct
tggttcttgttaacttcagcaaatctcagcaaagcagcctggggagcactccagaagaac
aattcccaattgatgatccgttcctatgagctgggagtactatttttaccatctcccatc
aaccgtggtcagggattctcttgtacagacaatggtagtccatcaaagaataaatgtggc
ttgtcagaaaacacaaaatcgcagagaacaaaactggtgactctgacctgggaaggaaac
agaagttcagattcatcttctgaagtaattccattgcctgtgccatacgaactccctcca
aagcagtactcctctgaagatgttccctggtcttgggacaggcgatactacaagaaggat
gtttgtggtcaagtttggccaagacacgttcagctgtacagttccccagattcctaa

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