KEGG   Vitis vinifera (wine grape): 100247189
Entry
100247189         CDS       T01084                                 
Name
(RefSeq) probable rhamnogalacturonate lyase B
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    100247189
Enzymes [BR:vvi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     100247189
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg BsuPI
Other DBs
NCBI-GeneID: 100247189
NCBI-ProteinID: XP_059591002
LinkDB
Position
18:complement(join(6273190..6273456,6273538..6273664,6273809..6273925,6274025..6274181,6274260..6274401,6274632..6274722,6274936..6275042,6275145..6275300,6275549..6275719,6276095..6276236,6276719..6276838,6276921..6277040,6277338..6277388,6277614..6277735,6278358..6278399))
AA seq 643 aa
MSPLGVQLYIQDRHVVMDNGILQVTLSNPGGIVTGIRYSAIDNLLEVLNDETNRGYWDLV
WSVPGSAGIFDVIKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLRGSS
GFYSYAIYEHLKEWPAFTLAETRIAFKLRKDKFHYMAMADNRQRFMPLPDDRLPGRGQPL
AYPEAVLLVNPVEPEFKGEVDDKYQYSCDNKDNRVHGWVCLEPPVGFWQITPSDEFRTGG
PVKQNLTSHVGPTTLAMFHSAHYAGEPLVPKFGPDEPWKKVFGPVFIYVNSVFGDGDPFW
LWEDAKEQMTIEVQSWPYSFPASEDFPSSDQRGNVSGRLLVQDGYISDDYILASCAYVGL
APPGDVGSWQRECKDYQFWTQADLGGYFCINDIRPGDYNLYAWVPGFIGDYKLDAVITIT
PGCDVFVGDLLYEPPRDGPTLWEIGIPDRSAAEFYSPDPNPTYVNKLFIGHPDRFRQYGL
WERYAELYPDGDLVYTIGVSDYTKDWFFAQVTRKKDNNTYQGTTWQIKFTLDTVDQIGTY
KLRVAIASATLSELQVRVNDPKANPPHFTSGLIGRDNTIARHGIHGLYWLYSVNVLGNLL
VEGENTIFLTQPRSTSPFQGILYDYIRLEGPPSPNSNSSKKLA
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgtcgcctctgggagtacaactgtatattcaagatcgtcatgtggtaatggataatggc
atccttcaagttacattatcaaatccagggggaattgtcactgggatccgatatagtgcc
attgacaatctgcttgaagttcttaatgatgaaactaacagaggttactgggaccttgtt
tggagtgtaccaggaagtgctggaatctttgatgtgattaagggaacaaattttagggtg
atagtggaaaatgaagaacaagtagagatctcattcacaagaatgtgggatccctcactt
gagggcaagttggtaccgttgaatatagataaaaggtttataatgcttcgaggttcctca
ggcttctactcctatgccatttatgagcacttaaaggaatggcctgctttcacccttgct
gaaactaggattgcattcaagctcagaaaagacaagtttcactacatggccatggcagat
aacaggcaacggttcatgcccttgccagacgataggttaccaggacgaggccaacccttg
gcctacccagaagcagttttacttgtcaatcctgtggagccagaattcaaaggagaggtg
gatgacaagtatcaatactcttgtgataacaaagataaccgggtccatgggtgggtatgc
cttgaacccccagtggggttctggcaaattacacccagtgatgagtttcgaactggtggg
cccgtcaaacagaatctaacctcacatgtgggccctacaacccttgcaatgtttcacagt
gctcattatgcgggagagcccctggtgcccaaatttggacctgacgagccatggaagaaa
gtttttggcccagtttttatctatgtcaattctgtttttggtgacggtgacccattttgg
ctatgggaagatgccaaggaacagatgacgattgaagtccaaagctggccctacagcttc
ccagcctcagaggattttccatcttcagatcagcggggcaatgttagtggcagattacta
gtccaagatgggtatatcagcgatgactatatattagcaagctgtgcttatgtcggattg
gcgccaccaggagatgttggatcatggcaaagagaatgcaaggactaccaattctggacc
caagccgacctgggaggctatttctgcattaatgatattcgacccggtgactataatctt
tacgcatgggtcccgggttttattggggattataaattagatgctgtcattaccataacc
ccaggctgtgatgtttttgtgggtgatcttctatatgagcctccaagagacggacctaca
ttgtgggaaataggcattcctgatcgttctgccgcagagttctacagtcctgatccaaac
ccaacttatgtcaacaaactatttatcggtcatcctgacaggtttaggcagtatggatta
tgggaaagatatgcagaattatatcctgatggtgatttagtttacacaattggtgtcagt
gactatactaaagattggttctttgctcaggtcaccaggaagaaggataacaacacatat
caaggaactacatggcaaattaagttcacactcgacaccgtggatcagatcggaacctac
aagctgagagtggcaattgcctcagcaacactttccgagttgcaggtccgggtcaatgat
ccaaaagcaaatcctcctcattttacaagtgggctaatagggagggacaacacaattgcg
agacatggcattcatgggctctactggctttatagtgtgaatgtactggggaatctgctt
gtggaaggtgagaataccattttcctcacgcagccaaggagtaccagccctttccagggg
atcttgtatgactatattcgtttagaaggtcctccgtctcccaattccaattccagcaag
aagcttgcttga

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