KEGG   Vitis vinifera (wine grape): 100247318
Entry
100247318         CDS       T01084                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2
  KO
K18995  ATP-dependent RNA helicase DHX29 [EC:5.6.2.6]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:vvi03012]
    100247318
Enzymes [BR:vvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100247318
Translation factors [BR:vvi03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    100247318
SSDB
Motif
Pfam: OB_NTP_bind UBA_DHX29 HA2_C DEAD Helicase_C HA2_N DSRM_DHX29 nSTAND3 AAA_19 AAA_22 ATPase
Other DBs
NCBI-GeneID: 100247318
NCBI-ProteinID: XP_002263889
UniProt: A0ABY9CZ41
LinkDB
Position
12:join(22272169..22272456,22275813..22275918,22276058..22276251,22280069..22280122,22280800..22280950,22281036..22281448,22281818..22282036,22288969..22289080,22289237..22289434,22290135..22290214,22297615..22297737,22297904..22297990,22306218..22306318,22318664..22318721,22321214..22321279,22328720..22328802,22328918..22329101,22329318..22329464,22329567..22329668,22329774..22329926,22341661..22341765,22355597..22355737,22355855..22355944,22356029..22356085,22379078..22379161,22380341..22380439,22380540..22380680,22381039..22381109,22386041..22386110,22387415..22387507,22393328..22393540,22394581..22394673,22396423..22396545,22397590..22397667)
AA seq 1458 aa
MAPKKKQQQNKPSSSKSKSKSQTSAGPKLQISAENENRLRRLLLNSGRSGPASSPAPADD
TLSKAQKAKKLRSVYEKLSCEGFSNDHIELALSALKEGATFESALDWLCFNLSSNELPLK
FSSGTSLHANEGGSIGIISTAREDWTPSVYSSGNIEDDEVSGISIRIKGRRDDDSVDSRQ
QSQADWIRQYVAQQEEDESKTWEDDAVDDYSTKKVAEPRSYETIAKEYHAARLEALSAKE
KGDKKGQEQAGHIIRKLKQELSALGLSDNSLESGFRYEHASGFASEDMSYNSMPEKHPEA
ITLCEVEGGSVMHPSESTFDGSIKECFSSTELSMNSVSSSVPLEERIAAQEDSGDVELSN
FFEDAPSSEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQLCQRS
GWEAPKLNKVLGKENGFCYAVSVLRKSTGRGKSRKAGGLTTLELPDQLEAFESAEDAQNA
VAAYALYQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSILDAGDS
GSTAFVDVTDNSLPKKFQMPQIEENRNLNAAGPDLKPGRVGNFKEAESSYLKQEYENKMK
IGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDMIEAGN
GGYCNIICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKLLFCTT
GILLRKLAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLKVILMSA
TVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASIRYETSIKQKT
SAVNNRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQNLKRLNEDVIDYDL
LEDLVCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHSSIASDDQ
RKVFLQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISQ
ANAKQRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVELCLQIKLLSLGNIK
PFLSKALEPPTEEAMTSAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIF
GCLSPILSISAFLSYKSPFLSPKDERQNVERAKLALLTDQVDGASDSNDGARQSDHLVMM
VAYKKWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGNLLADIGLISLPKKYQI
ERKKKENLNSWFSDISQPFNTYSHHFSIVKAILCAGLYPNVAATEQGIAGVALGNIIQSS
GSATKGRPVWYDGRREVHIHPSSINGNLNAFQYPFLVFLEKVETNKVFLRDTTIISPYSI
LLFGGSINVQHQSGMVNIDGWLKLAAPAQIAVLFKELRVTLHSVLKELIRKPEKAIVVNN
EVVKSIIHLLLEEEKSPK
NT seq 4377 nt   +upstreamnt  +downstreamnt
atggctcccaagaagaagcagcagcagaacaagccttcatcatcgaaatcgaaatcgaaa
tcccagacatccgccggtccgaagctccagatttccgctgagaacgagaaccgcctccgc
cgcctcctcctcaactccggccgttccggaccggcctcttctccggctccggctgacgac
actctctccaaggcgcagaaggcgaagaagcttcgctctgtatacgagaagctctcttgc
gaaggtttctccaatgatcacatcgagcttgctctctctgctctcaaggagggtgctaca
tttgagtctgctcttgattggttatgcttcaatttgtcaagcaatgaacttccgttgaag
ttttcaagtgggacttcccttcatgcaaatgaaggaggttctattggaatcatatcaact
gcacgggaagattggactccatctgtgtattcttcaggtaacattgaggatgatgaagtg
tctggaatttccattagaatcaaggggcgaagggatgatgatagtgtagattcgcgccaa
caatctcaagcagattggatcaggcaatatgttgcacaacaggaagaggatgaatctaaa
acttgggaagatgatgcagttgatgactattccaccaagaaggttgctgaaccaaggtct
tatgaaacaattgccaaagagtaccatgctgcacggttggaagctttaagtgctaaagag
aaaggggacaagaaaggccaggaacaggcgggccatattatccgcaaactcaagcaggag
ttgtctgctctaggactatcagataacagcttggaatcaggattcaggtatgagcatgct
tctggttttgcatctgaagacatgtcttataattctatgcctgagaaacaccctgaggca
ataacattatgtgaagtagaaggtggctctgttatgcatccgagtgaatcaacttttgat
ggaagtataaaggagtgcttcagctccactgagctttcaatgaattctgtttcctcgagt
gttcctttagaggaaaggattgccgcacaagaggattcaggtgatgtagagcttagtaat
ttctttgaagatgctccatccagtgaagtcttgcctcatgaagtcctgaaactacaaaat
aaagaaaagatgaaagaactatctagtgggaagaatttggagaaattagagggtatctgg
aagaagggtgacccccaaaaaattcctaaggctgttcttcatcaactatgtcagaggtca
ggctgggaagcaccgaaattaaacaaagtgcttggaaaagaaaatggtttctgttatgct
gtcagtgtactgcgtaaaagtactgggaggggtaagagccgaaaagctggagggttgact
acccttgagcttcctgaccagcttgaagcttttgaatctgctgaggatgctcagaatgcg
gttgcagcatatgctctttatcagctgtttcctgatcttcctattcacttggcaattact
gaaccatatgcttcatttgtcatacaatggaaggaaggtgaatcatcaatcagaatagaa
gatagtgaggaagaccgaagggctggttttgtaaattcgatattagatgctggggattct
ggatctactgcatttgttgatgttacagataattctcttccaaaaaagttccaaatgccc
caaattgaagaaaatagaaatttaaatgctgctggtccagatctgaagcctgggagagtt
ggtaattttaaagaagcagagagttcttatctgaaacaggaatacgagaataaaatgaaa
attggaaaatataaggacatgttgaaaactagatctggacttcctatagcggagcttaag
agtgagatattgcaagtgctgaaggagaagagtgttcttgttgtttgtggggaaactggt
tctggaaagacaactcaggtcccacaatttatattggatgacatgattgaagcaggaaat
ggtggatactgtaacattatatgcacgcaaccaaggagaatagcggctatttctgtggct
gaaagggttgctgatgagcgctgtgaaccttcaccaggttcagatggttctgtggttggt
tatcaagttcgtcttgatagtgcaagcaatgtaaggacaaagcttcttttctgtacaaca
ggcattcttctaaggaaacttgcgggtgacaaaaacttgagtggaattactcatgttata
gttgatgaagtccacgaacggtctctcttgggtgattttctgctcattgttttgaagaat
ctgattgagaagcaatctactgatagcacaccaaaattgaaagttattcttatgtctgca
actgttgattcaaatttgttttcaagatactttggtggttgcccagtaattactgcagtg
ggccgaacacatcctgtgtcaacttactttcttgaggatatatatgagagcattgactat
cgcctggcttcagattctccagcctctattagatatgagacatctataaaacagaagact
agcgctgttaacaaccgtagggggaaaaggaatcttgtattatctgcatggggtgatgac
tctgtgctttctgaagagtgtatcaacccatattatgttccaaatgcttaccaatcatac
agcgagaaaacacaacagaatctgaaaagattgaatgaagatgttattgattatgatctt
cttgaagaccttgtgtgctacgttgatgaaacttatcctgcgggtgccatacttgttttt
ttgcctggagttgcagaaatctacatgttactagataaactagctgcttcttatcgattt
cgcggattgtcttctgattggcttcttccattgcattcatctatagcatcagatgatcaa
agaaaggtgtttctgcagcctcctgaaaacatacgaaaggttattatagccacaaacata
gcagaaaccagcataacgatagatgatgtggtgtatgtgattgattgtggaaagcataag
gaaaatcgttataatccacagaagaaattgtcaagcatggttgaggattggatatctcaa
gcaaatgcaaagcaacgacgagggcgagctggacgagtaaaacccggaatttgcttttcc
ctatatacacactatagatttgaaaaactcttgcggccatttcaggtacctgagatgctg
cgcatgccactagtagaattgtgtttgcaaattaagttactttctctgggtaatataaag
ccatttttgtctaaggctttagaacctcccacggaagaggctatgacctcagcaatttca
gtgttatatgaggttggtgctattgaaggggatgaagagttgacgcctcttgggcatcat
ttggctaaacttcctgttgatgtgttaattggaaagatgatgttatatggggcaatattt
ggttgcttatcacccattctctcaatttcagcatttttgagctataagtcaccattttta
tctccaaaagatgagagacaaaatgttgaaagagccaaattggcattgttgactgatcaa
gtagatggtgcaagtgattcaaatgatggtgccaggcaatctgaccacctagtaatgatg
gttgcatacaagaaatgggagaggattctacatgagaaaggagcaaaagccgcacaacat
ttttgcaattcatattttttaagcagttcagtgatgcacatgataagagacatgcgagta
caatttggaaatttgctagctgatattgggcttatcagtctaccaaagaaatatcagatt
gagaggaaaaagaaagagaatctcaacagctggttttctgatatctcacaaccattcaat
acatattcacatcatttttcaattgtgaaggcaattctttgtgctggtttatacccaaat
gtagctgccactgagcaaggcattgctggagtagctcttggcaacattatacagtcttct
ggttcggcaacaaaaggccgtccagtctggtatgatggaagaagagaagttcacatacat
ccttcttctatcaatggtaacttgaatgcttttcagtacccattcctcgtcttcctcgaa
aaggttgaaaccaataaagtatttcttcgggatacaaccatcatctctccatactctatt
ttgctgtttggtggctccatcaatgttcagcatcagagtggaatggtcaatatagatgga
tggttaaaactggcagcaccagctcaaattgctgtcctgttcaaagaactccgggtaact
cttcattctgttctgaaggagctgattagaaaaccagagaaggcaattgttgttaataat
gaagttgtcaagtctattatccatttgttgttggaagaagagaaatccccaaagtaa

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