KEGG   Vitis vinifera (wine grape): 100247411
Entry
100247411         CDS       T01084                                 
Name
(RefSeq) coatomer subunit beta'-1
  KO
K17302  coatomer subunit beta'
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100247411
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100247411
Membrane trafficking [BR:vvi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100247411
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100247411
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_HPS5 WD40_RFWD3 WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N TPR_1 TPR_GEMI5 TPR_2 WD_LRWD1 TPR_8 TPR_CcmH_CycH
Other DBs
NCBI-GeneID: 100247411
NCBI-ProteinID: XP_010656342
UniProt: F6HH36
LinkDB
Position
11:join(3410956..3410958,3411412..3411432,3411558..3411619,3411749..3411803,3418279..3418315,3418396..3418721,3419015..3419146,3419235..3419383,3421722..3421790,3422114..3422264,3422383..3422448,3425146..3425334,3425798..3425938,3426030..3426104,3426241..3426417,3426509..3426600,3426688..3426804,3427777..3427891,3428038..3428109,3429309..3429505,3429667..3429760,3429986..3430092,3431416..3431548,3432414..3432554)
AA seq 906 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIYDYLSQTMIKSFEVTDLPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVTIFEAHADYIRCVAVHPTLPYVLSSSDD
LLIKLWDWDKGWTCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDDHMKGVNCVDYFTGGDKPYLITGSDDQTAKVWDYQTKSCVQTLEGHTHNVSSVCFHPE
LPIIFTGSEDGTVRIWHATTYRLENTLNYGLERVWALGCMRGSRRVVIGFDEGTIMVKIG
RDEPVASMDNSGKIIWAKHNEIQTVNIRSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNSNGRSVVVCGDGEYIIYTSLAWRNRSFGSALEFVWSSDAEYAVRESTSRIKIFSKTFQ
EKKNIRPTFSAEHIYGGALLAICSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDSSFYILKYNRDTVVSHFNSGMPSDEQGVEDAFELLHEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLNLIEYKTLVM
RGDFQRASEILPLIPQEHYNSVARFLEARGMLEDALEVATDPDYRFDLAIQLGRLGTAKE
IASEVQSETKWKQLGELAMSNGKFEMAEECLLHAMDLSGLLLLYSSFGDANGISKLVSLA
KKQGKNNVAFLCLFTLGKLEECLQLLVESNRIPEAALMARSYLPSKVPEIITIWRNDLNK
VSKKAAESLADPEEYPNLFEDWQVALDIESKISEKRGTYPPAEHYLNYAERSNINLMESF
KSMQIDEEESILENGNSDHREIQANGASEYQEEAVNVDVNSPDRILVNGNEGEEERGANN
EGTSTD
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgcctctcagacttgaaattaagagaaaacttgcacaaagatctgaaagagtaaaatca
gtggatctacatccaactgaaccatggatccttgcaagtctttattctggaactgtgtgc
atttatgattacctgtcacagacaatgataaagtctttcgaggtcaccgacttgccagtc
cggtcagcaaaatttatagctcgtaagcagtgggtggttgctggagctgatgacatgttt
atccgtgtatacaattacaatactatggataaggttacaatttttgaagcacatgcagac
tacattagatgtgtggctgtccatccaacacttccatatgtattgtcttcatctgatgac
ttgcttataaagctttgggattgggataaaggttggacgtgtactcagatttttgaaggg
cattctcactacgtgatgcaagtgacatttaatccaaaagacaccaacacctttgcaagt
gcctccctcgatcgcactataaagatttggaatctcggctcccctgacccaaattttact
ttggatgaccacatgaaaggggtaaactgtgttgattacttcactggtggtgacaagcca
tacttaatcacgggttctgatgatcaaactgccaaggtgtgggactaccaaaccaaaagt
tgtgttcagacactagaaggccacacacacaatgtttcttcagtctgtttccatccagag
cttcctattatttttactggttcagaagatgggactgttagaatatggcatgcaaccact
tataggcttgaaaacacattaaattatggacttgaacgagtttgggccctgggatgtatg
agaggttcacgacgggttgtgatcggttttgatgaaggaaccattatggtgaaaattggt
cgagatgaaccagtagctagtatggataatagtggaaagatcatatgggctaaacacaat
gaaattcaaacagttaatattagaagtgttggggcagattatgaggttacagatggagaa
agattgcctttggctgtgaaagagttgggaacctgtgacctttatcctcaaagtttgaag
cacaattctaatggaaggtctgttgttgtttgtggggatggggaatacataatatacaca
tctttggcatggagaaatagatcatttggctcagcgctggaatttgtttggtcatcagat
gcagaatatgctgtgagggaaagtacatcaaggattaagattttcagcaaaacattccag
gaaaagaagaatattcgaccaaccttttctgctgaacacatttatggaggggcacttctg
gcgatatgctcaaatgacttcatttgtttttatgactgggctgagtgcaggttgattcgg
cggattgatgtcaatgtcaagaatctttattgggctgatagtggtgatttagtggcaatt
gcaagtgattcatcattttacatcttaaagtacaatcgtgacacagttgtgtcacatttc
aatagtggaatgcctagtgatgaacagggtgttgaggatgcttttgaactcctccatgaa
ataaatgagcgagtcagaactggaatatgggttggggactgcttcatttacaataactcc
tcttggcgacttaactattgtgttggtggtgaggtaaccaccatgtttcacttggaccgg
cctatgtatttgttaggatatcttgccagtcaaagtcgcgtttatcttatagacaaagag
tttaatgttatgggatataccttacttctcaatttgattgagtacaagacacttgtaatg
cgtggagactttcaacgtgcaagtgaaattttacctttgattcctcaagagcactacaat
agtgtggctcgtttcttggaagctcgaggtatgctggaggatgcactggaagttgccaca
gatcctgactatagatttgatctagctatacagctaggcagactaggtactgcaaaggaa
atagcttcagaagtacagagtgaaaccaaatggaagcagttgggagaattagctatgtcc
aatggaaagtttgagatggctgaggaatgccttttacacgccatggacttgagtggtttg
ttgctcctctattcttcttttggtgatgccaatggaatatcaaaacttgtttcactggct
aaaaagcaggggaagaataatgtcgcattcctttgtttattcacgctgggtaaattggaa
gagtgccttcagctgttggtggagagtaatcggatacctgaagctgctttaatggcacga
tcttaccttccaagcaaggttccagagataatcacgatttggagaaatgacctcaacaag
gtgagcaaaaaagctgcagaatcattggcagatcctgaagagtaccctaatttgtttgag
gactggcaggttgctcttgacattgaatctaaaatttcagagaaaaggggtacttatcct
cctgctgaacattatttgaactatgctgagagatcaaacatcaaccttatggaaagtttt
aaaagcatgcaaattgatgaggaggagtcaatacttgaaaatggaaattcagatcacagg
gaaatacaagctaacggagcctctgaataccaagaagaggctgttaatgtggatgttaat
tctccagacaggatacttgttaatggtaatgagggtgaagaagagcggggtgcaaataat
gaaggaacttctactgattga

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