Vitis vinifera (wine grape): 100247566
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Entry
100247566 CDS
T01084
Name
(RefSeq) cyclin-dependent kinase D-3 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03022
Basal transcription factors
vvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100247566
09124 Replication and repair
03420 Nucleotide excision repair
100247566
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vvi01001
]
100247566
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100247566
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100247566
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100247566
Enzymes [BR:
vvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
100247566
2.7.11.23 [RNA-polymerase]-subunit kinase
100247566
Protein kinases [BR:
vvi01001
]
Serine/threonine kinases: CMGC group
CDK family
100247566
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100247566
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
100247566
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100247566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
100247566
NCBI-ProteinID:
XP_002280613
UniProt:
D7SJ61
LinkDB
All DBs
Position
17:join(3147009..3147119,3147938..3148236,3148321..3148429,3149174..3149299,3151510..3151745,3151835..3152158,3164886..3164949)
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AA seq
422 aa
AA seq
DB search
MSEVPNVFSKKVADRYLKREVLGEGTYGVVSKAIDTKTGQIVAIKKIRLGKHKEGVNFTA
LREIKLLKELKDPHIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSLADIKSFLQ
MTLKGLAFCHKKWVLHRDMKPNNLLIGDKGQLKLADFGLARIFGSPDRKFTHQVFARWYR
APELLFGSKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPAQWPD
MVYLPDYVEYQFVPAPPLRSLFPMASDDALDLLSKMFTYDPKTRISVQQALEHRYFTSGP
LPTEPAKLPRPHPKRESLNTRVSDFNQQEGPTVLSPPRKSRRVMPQRDGFEENAHQVEKS
DEHVNDIRQATGERMSWNEHAPMSIDFSVFGSRPPPRPTINSADKSRLKRKLDLEFQQPD
QD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggtcccaaatgttttcagtaagaaagtagccgatcgctaccttaagcgcgaa
gttctcggggaaggtacctatggagtcgtttccaaagccattgatacaaagactggacag
atagttgcaattaagaaaattaggctggggaagcacaaagaaggcgtgaactttactgct
cttcgggaaattaaactgctgaaagaactgaaggatccccatataattgagttaattgat
gcatttcctcacaaggggaacttgcatcttgtgtttgaatttatggagactgaccttgaa
gcagttattcgtgataggaatatagtcctttcacttgctgacataaagtcattcctgcag
atgacattaaaaggacttgctttttgccacaagaaatgggttttgcatagggatatgaag
ccgaataacttgttgataggagataagggacagcttaaacttgcagattttggattagca
cgtatctttgggagccctgaccgcaagtttactcatcaggtatttgctcgatggtataga
gcacctgagctgttgtttggctccaagcaatatggtcctggggttgatgtttgggctgca
gcttgtatatttgctgaacttctcctccgccgaccttttctacagggttctagtgacatt
gatcaattaggaaagatatttgcggcttttggaacaccaaagcctgctcagtggcctgat
atggtataccttcccgattatgttgaataccaatttgttcctgcaccccctttgcgttca
ttgtttccaatggccagcgatgatgctttagatctgctatcaaagatgttcacatacgat
ccaaaaactagaatttcggtgcagcaggcattagagcacaggtacttcacatctggacct
ctgcctacagaaccagctaagctcccaagacctcaccctaagagagaatctctcaatact
agggtttcagattttaatcagcaggagggtcctactgtgttatctcccccaaggaagtct
aggagagtgatgccacaacgtgatggatttgaagaaaatgctcaccaagttgagaagagt
gatgaacatgtaaacgatatcagacaggcaactggtgagagaatgagctggaatgaacat
gcaccgatgtcaatagatttttctgttttcggatcaagacccccacctaggcctactatt
aacagtgctgataaatcacgcctaaaaaggaaattagatcttgaattccaacaacctgat
caggactga
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