Vitis vinifera (wine grape): 100247708
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Entry
100247708 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100247708
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100247708
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100247708
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100247708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_13
Motif
Other DBs
NCBI-GeneID:
100247708
NCBI-ProteinID:
XP_002264470
UniProt:
D7U9D3
LinkDB
All DBs
Position
18:complement(join(30062034..30062146,30062257..30062308,30066799..30066900,30067340..30067539,30070727..30070820))
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AA seq
186 aa
AA seq
DB search
MEEGPPANDVCSVCHGGFNIPFQANCSHWFCGNCILLVWQHGSALQPCKCPLCRRQITLL
VPAGASQRQCNDPEVSAIVGRVERYNRLFGRCDSSLFQRMRDLPFLLRRLLRELMDPQRS
LPLLIRARVYFAMLTSIIYIVSPVDIIPEGVVGILGLLDDFIIAFICFLHIAAIYRSVLV
HRHGGP
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcccaccagcgaatgacgtctgcagtgtatgccatggaggcttcaacatc
ccctttcaagccaattgctctcattggttctgcgggaattgtattctacttgtttggcag
catggatcagcacttcagccatgcaaatgccctctatgccgtcgtcagattactttgctg
gttcctgctggggcttcacaacggcagtgtaatgatcctgaagtttctgcgatagtagga
agggtagaacgatataaccgtttatttggtagatgtgacagtagtctctttcagagaatg
cgagatcttccttttctccttcggaggttgttgcgagaattgatggatcctcaaagatct
cttcctcttctcatcagggcacgagtctattttgcaatgttaacaagtattatctacata
gtcagccctgtagacattattccagaaggggttgtgggaatcctaggtcttttggatgat
ttcattatagcattcatctgtttcctccatattgctgccatttatcggtcagtacttgtt
catcgtcatggaggtccttaa
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