KEGG   Vitis vinifera (wine grape): 100247727
Entry
100247727         CDS       T01084                                 
Name
(RefSeq) splicing factor U2af small subunit B isoform X2
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100247727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvi03041]
    100247727
Spliceosome [BR:vvi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100247727
 Complex B
    100247727
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 zf-CCCH_4 Torus
Other DBs
NCBI-GeneID: 100247727
NCBI-ProteinID: XP_002277445
LinkDB
Position
8:complement(join(19158673..19159171,19159274..19159400,19160709..19160790,19160884..19160970,19161688..19161924))
AA seq 343 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP
GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL
RRQLFGRNRRRRSRSRSRSPYRHRGHEEHPHGPHGPHGPHGPHGPRGPRGSNRRDDDRDH
RYHDRGGRRPRSRSPARRGGRSRSPGGRRNKSPVREGSAERRAKIEQWNREREQAEATNK
NDNSHSDNGNNNNDFEQDDQQYYNPQHQEEDQQQQQQHGGYNY
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggcagagcacttggcatctatattcggaacagagaaggatcgcgtcaactgtccgttc
tacttcaagatcggagcttgcaggcatggagatcgatgctccaggcttcacaccaagccc
agcatcagccccaccctcctcctttccaacatgtaccaaaggcctgatatggtcacccct
ggcgtcgatcctcagggccaacctctcgatcctcgcaaaatccaagagcacttcgaggat
ttttatgaagatttatttgaggagctgagtaagtatggagagattgaaagcttgaacatc
tgtgacaatttggctgaccatatggtgggtaatgtatatgttcagtttagagaggaagaa
catgctgcaaatgcacttcgaaatttgaatggaaggttttatgcagggcgtcccatcatt
gttgacttctccccagttacggatttccgtgaagctacatgtaggcaatatgaggaaaat
atatgcaatcgcggcggctactgcaacttcatgcatctgaaaaagattagtagggagttg
aggaggcaattgtttgggagaaacaggcgtaggcgcagtcgaagcagaagccgcagtcca
tacagacaccgtggtcatgaggagcatccacatggtcctcatggtcctcatggtccacat
ggtccacatggtccacgtggtccacgtggctctaatagaagagatgatgacagagatcat
cgttaccatgatagggggggtaggaggcctagaagcagaagtcctgcacgtagaggggga
cgaagcagaagccctggtggaagaaggaataagagtccagtcagggaaggcagtgctgag
agaagggctaagattgagcaatggaatagggaaagagaacaggcagaagctactaataag
aatgataatagccacagtgacaatggtaacaacaacaatgactttgaacaagatgatcaa
cagtattataatccacagcatcaggaggaggaccagcagcagcagcagcagcatggagga
tacaactattga

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