Vitis vinifera (wine grape): 100247757
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Entry
100247757 CDS
T01084
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100247757
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100247757
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100247757
NCBI-ProteinID:
XP_002267384
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Position
16:join(140141..140614,140702..141057,141181..141316,141585..141806)
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AA seq
395 aa
AA seq
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MAFHGCCFTLALALLLHILVILFTPNTILPANAHRSSNSPPAMKLNVIDRCWRRSRNWQR
HRQLLATCSVGFAGKMTNNIGTDLIRYEVTDPSDHPLNPKPGTLRFGATNIKGKVWITFK
QSMRIKLEKPLLISSFTTIDGRGASIHIAGGACLLLHEVTNVIIHGIRIHHCRAQMPGQV
LGPDSKMMELGHVDGDAIRLVASSQIWIDHNTLYECQDGLLDVTRGSTDITISNNWFRNH
DKVMLLGHDDEYLQDKNMKVTVAFNHFGPNCYQRMPRVRHGYTHVVNNLYLGWEQYAIGG
SMNPSVLSEANLFIAPESGTKEVTWRQDNNENGRSWNFQSVRDVFENGAHFSQTGDSAKR
PHYNHLQTFRVADAKAVRPITRSSGALRCRKRSRC
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggctttccatggatgctgcttcactttggctttggctcttctccttcacatccttgtc
atcctcttcactcccaacactattcttccagctaatgctcatagatcaagtaactcccct
cctgccatgaagttgaacgtgattgatcgatgctggagaaggagccgtaactggcagagg
cacagacaactgctcgcaacctgctcggtgggttttgctgggaagatgactaacaatatt
ggaacagacttgatacgctatgaagttacagatcctagtgaccaccccttgaatcccaag
ccaggaactctcagattcggtgccaccaacattaaaggaaaggtgtggataacattcaaa
caaagcatgagaatcaaactcgagaaaccgctactcattagtagtttcaccaccattgat
gggagaggtgccagcattcacattgcaggaggtgcatgcctcttgcttcatgaggtgact
aatgtaatcatccacggtatccggattcaccactgccgagcccaaatgcctggtcaagtg
ttgggtccagattcaaagatgatggagctgggtcatgtagatggggatgcaatcaggctg
gttgcatcctcacaaatttggatagatcacaatacactctacgagtgccaggatggtctc
ctggatgtcacccgtggttctacagacatcaccatctcaaacaactggttcagaaatcat
gataaagttatgctcctaggccatgatgatgagtatcttcaagacaagaacatgaaggta
acagttgccttcaaccattttggtcctaattgctaccagcggatgccaagggtccgccat
ggatatacacatgtagtcaacaatctctatctgggatgggaacagtatgccataggagga
agcatgaaccctagcgttttgagtgaagcaaacctctttattgcaccagaatcagggacg
aaagaggtaacctggagacaagacaacaatgaaaatggaagatcatggaattttcagtct
gtgagggatgtttttgaaaatggagctcatttcagccaaacaggtgactctgcaaaaagg
ccacactataaccatctacagacgttccgagttgcagatgccaaagcagtaaggccaatt
acaaggtcatcaggtgctttgcgatgccgtaaaagatccagatgctga
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