KEGG   Vitis vinifera (wine grape): 100247826
Entry
100247826         CDS       T01084                                 
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex isoform X2
  KO
K03363  cell division cycle 20, cofactor of APC complex
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100247826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100247826
   03036 Chromosome and associated proteins [BR:vvi03036]
    100247826
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     100247826
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    100247826
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_RIG_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 WDR54 Ge1_WD40 Nbas_N
Other DBs
NCBI-GeneID: 100247826
NCBI-ProteinID: XP_002277711
LinkDB
Position
16:complement(join(3998126..3998269,3998350..3998511,3998664..3998980,3999063..3999165,3999248..3999517,4000142..4000339,4001172..4001270,4001357..4001428))
AA seq 454 aa
MSRFNGDWYSPTRLHDSPTQYHFPGDRFIPNRSLMDLDQAHTLLTSRTREVCNSTFGDEY
RRKLEENLFFDSEGRPFRMLVFRGSPKSSKKSIRFLDEMQQQDEAEALHNKNIKQFQYRH
LPKKESRVLDAPRINDDYYLNIMDWGKRNILAIALGSDLYLWNAETGHSQKLMQVDDQED
YPTSIAWCEDGRRVAVGHLSSKLQLWDAETFKLIRSLEGHDDRVGIAAWNGQILTSGSRD
KSIINHDVRARNSLTCRVQIHSQEVCGLKWSITGNKLASGGNENLIYIWEASKMCSSNFL
HRFSGHQAAVKALAWCPYQSDVLASGGGTLDGCIKIWNIQKGTCINSIRANAQICGLEWN
RHHKEILSGHGFSATGHQNELCLWKYPSMSKLGELKCHSSRVLHLSQSPDGSTVVSAGAD
ETLRFWEVFGPPVTDSSRVSDLDSLLSFKRSLIR
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgagcagattcaacggcgattggtactcgcctactcgcctccacgacagccccacccag
taccattttccgggtgataggtttattcctaatagaagtttgatggatcttgatcaagcc
cacactttactgacatccaggacaagagaagtttgcaattccacattcggcgatgaatac
aggcggaagttggaggagaatctgttttttgattcggaggggagaccatttaggatgttg
gtcttcagaggaagccccaaaagtagtaagaaatcaattcgttttcttgatgagatgcag
cagcaggatgaggcagaggcactgcataataaaaacataaagcaatttcagtatcgacat
ttgcctaagaaagaatctagggtcctggatgcaccaagaatcaatgatgactactacttg
aacatcatggattggggaaaaagaaacattctggctattgctttgggctcagacttgtac
ctatggaatgctgagacaggacacagtcaaaaattgatgcaagtagatgatcaagaggat
taccctacaagtatagcttggtgtgaggatggcagaagggttgcagtagggcatttgagc
tcaaaacttcagctctgggatgctgagactttcaagctcattagaagcctggaaggacat
gatgacagggtaggtattgccgcatggaatggtcaaattctaacatctggaagccgagac
aaatccattatcaatcatgatgtaagagcaagaaacagtttgacttgccgtgtacaaata
cacagccaagaagtttgtggattgaaatggtcaatcacaggaaacaaattggcaagtggt
ggcaatgaaaacctcatctacatttgggaagcttccaagatgtgctcatccaatttcttg
caccggttcagtggtcatcaagctgcagtcaaggcccttgcctggtgcccatatcagtct
gatgtacttgcctctggaggaggcacattggacggatgtatcaagatatggaacatacaa
aaggggacatgcatcaacagcatacgtgctaatgcacagatttgtggattggaatggaac
aggcatcataaggagatattgagtggtcatggcttcagtgcaactgggcatcaaaatgag
ctatgtctgtggaagtatccctccatgtccaaactaggagagctcaagtgccactcatcc
agagtccttcacctctcccagagcccagatggatcaactgtggtatcagctggtgcagat
gagactcttcgcttttgggaggtttttggaccacctgtgacagacagttcaagggtttcg
gatctggacagcctcctgtcttttaagagatccctcataagatga

DBGET integrated database retrieval system