KEGG   Vitis vinifera (wine grape): 100247853
Entry
100247853         CDS       T01084                                 
Name
(RefSeq) DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03420  Nucleotide excision repair
vvi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100247853
   03460 Fanconi anemia pathway
    100247853
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100247853
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100247853
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    100247853
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100247853
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 100247853
NCBI-ProteinID: XP_010647232
LinkDB
Position
2:complement(join(6794002..6794212,6794442..6794665,6794752..6795012,6795097..6795207,6795772..6796590,6797249..6797413,6797689..6797777,6797904..6798118,6798643..6799508))
AA seq 986 aa
MVQFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLI
LYHLDANPNPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSGIAG
LIILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFLRRL
HLWPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEMRKTNKVDVDD
LTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLKYLD
SLRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNNNKNE
ANGDSVLVGTNGGVVLEEVLEESPKWKVLREVLKEIEDEREKQASSREDASAEGDEDDSG
IVLVACKDERSCMQLEDFIKSDPQKVMREEWEKYLLSKVELQGLQTRKKNKAKEPKGFGI
LNGEVPSTSGQNTEPTSISKLEHDALMAAASVISLAKKDTAVSDNSQPHIGSGGRGKGRG
KGRNIKITGKAQVSGHKVNNSNSEQGRNDKSEVFGSENDSQGKEIDPVGSGDFNENKDKG
ASVDKGVLQKHCQETDAPSFSNAKQLPLVHFYALESEKSNILDVLKPSIVIVYHPDMTFV
REIEIYKTENPSKKLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPVDQDV
RGLGLNSSIEPQAITSQNSITRKAGGRKEVEKEIQVIVDMREFMSSLPNVLHQKGMRIIP
VTLEVGDYILSPLICVERKSIQDLFGSFASGRLYHQVETMVRYYRIPVLLIEFSQDKSFS
FQSASEIGDDVTPNSIISKLSLLVLHFPRLRIVWSRSLHATAEIFASLKANQDEPDEAKA
IRVGVPSEEGIVENDVRAENYNTSAVELLRRLPGVTDSNYRAIMDGCKSLAELALLPVEK
LAELMGGHKAARTLREFLDAKYPTLL
NT seq 2961 nt   +upstreamnt  +downstreamnt
atggtgcagttccacgaacacatcatcacagagcttctcgaagactccaatggcggactg
gtggtgctctcctcaggcctctgcctccccaagctaatctcctctctcctcctcctccac
catccttcccaaggctcgcttctcctcctctcctcttccccttctcaaaagcaactcatc
ctttaccacctcgacgctaaccctaaccctaaccctaatcttccctccgagattactgcc
gatcttccggcgcaccaccgccactctctctacacgtctggctctgtttttttcatcact
tctcggattcttatcgttgatcttctaacttctagggttccgacttcgggcattgccggc
ctcattattctcaatgctcactctctatccgagacatgtacagaggcctttattgtgcga
attatccgatctctcaatccggcagcgtacgttcgggcgttttcggataagccgcacgcg
atggtgtcggggttcgcgaaggcggagaggataatgaagtgtttgttcttgaggaggttg
catctgtggccgaggtttcaggtgcatgtgtcgcaggagttggagaggtgtccgccggtg
gtggtcgacattagggttccgatgacggcgcacatgcaggggattcagaaggcaattgtt
gaggttttggatgcgtgtctgaaggagatgaggaagacgaataaggtggatgtggatgat
ctgacggtggagaatgggctgtttaagtcgtttgatgagattgtgaggcggcaattggat
cccatttggcatacgcttgggaagaagaccaagcagctggtttcggatttgaaaactctg
aggaaattgttggattatcttgttaggtacgatgcagtttcttatttgaagtatttggat
tcactaagagcatcagagaatattaggtctgtttggatatttgcagagtcgagctataag
atttttgagtatgcaaaaaaacgggtctatcattttgtgaggtcagatggtgggaaattg
ggtgggcagaataagagtgtgacaaacaaaaagagaaagttgaacaacaataagaatgaa
gcaaatggtgattcggtgctggtaggcacaaacggtggagtagttctggaggaagtgcta
gaggaatcaccaaagtggaaggtgttacgtgaggttcttaaagagatagaagacgaaaga
gaaaagcaagcttcttcaagagaagatgcttcagccgaaggtgatgaggatgatagtggc
attgttttagtggcttgcaaagatgaacgctcatgcatgcaacttgaagatttcatcaag
agtgatccacagaaggtcatgcgtgaagagtgggaaaagtatttgctaagcaaagtggag
ttgcaggggttacaaacacgtaagaaaaataaagcaaaagaacctaaagggtttgggata
cttaatggagaggttccttctacatctggacagaatacagaacctaccagcataagcaag
ctggaacatgatgcgctgatggctgcagcatcagtaataagtttagccaaaaaggatact
gctgttagtgataattcacaacctcatattggcagtggggggcggggaaaaggaaggggt
aaaggaagaaatataaaaatcacaggaaaagctcaggtttctgggcacaaagttaacaat
agtaatagtgagcaaggaagaaatgacaaatctgaagtatttggttcagaaaatgatagc
cagggaaaagaaattgatccagtgggttctggtgatttcaatgaaaacaaagataaaggt
gcatctgtggataaaggagttcttcagaagcattgtcaagagactgatgctccatcattc
agcaatgctaagcaactaccactggtgcacttttatgccctagaaagtgaaaagagcaat
atacttgatgttttgaagccttctatagttattgtttaccatccagacatgacttttgtc
agggaaattgaaatatataaaactgaaaatccctcaaaaaaattgaaagtttattttctg
ttttatgaagattccactgaggtgcaaaagtttgaggcaagcatacgcagggaaaatgga
gcatttgaatctttgattaggcagaaatcattgatgatgatccctgttgatcaggatgtg
cgtggcctgggattgaattcttccattgaaccacaagctataacttcccaaaactcaata
accagaaaggctggtggaagaaaggaagtggagaaagaaatccaggtcatagttgatatg
agggagttcatgagcagccttccaaatgttcttcaccagaagggcatgcgcattatacca
gttaccttggaagttggggattatatcctctctcctctaatttgcgtagagaggaagagt
atccaagatctttttggaagctttgcatcaggccgcctataccatcaagttgaaaccatg
gtacggtattatagaataccagtgcttctgattgaattttcacaagacaaaagcttttcg
tttcagtctgcaagtgaaattggtgatgacgtcacaccaaatagtattatttccaagctg
tcattgcttgttctacatttcccccgcctgcgcattgtctggtctcgcagtttgcatgca
accgcagagatatttgcttcactcaaggccaatcaggatgagcctgatgaagcaaaggca
atcagggtgggtgtcccctccgaagagggtatcgtggagaatgatgtgagagctgaaaat
tacaacactagtgcggtggagttgttgagacggctgccgggtgtaacagactctaactat
agggctataatggatgggtgtaaaagcttggcagaacttgcccttcttcctgtagagaag
ctagctgaattaatgggaggtcataaagctgcaaggaccctgagggagtttctggatgcc
aagtatccaaccttgctatag

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