Vitis vinifera (wine grape): 100247912
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Entry
100247912 CDS
T01084
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100247912
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
100247912
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
PhyR_sigma2
Beta-prop_IFT140_1st
PAH_ZNF598
Beta-prop_HPS5
tRNA_Me_trans_M
Motif
Other DBs
NCBI-GeneID:
100247912
NCBI-ProteinID:
XP_002279262
UniProt:
F6HN85
LinkDB
All DBs
Position
13:complement(join(2659643..2659955,2660057..2660155,2661907..2664952,2665902..2666235,2667218..2667376))
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AA seq
1316 aa
AA seq
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MNNLKLYSDLSLNLELRSAEEVVSFSAFDIERNRLVFASSDNFIYTTQLPSSQNERVWGK
TSSYSKVEPIDLEPGDFITAFDYLMEKEALIVGTSSGLLLLHNVDDNAIEVVGRVEGGVK
CISPSPDGDLLGIITGFGQIVVMTHDWDVLYENTLDDLPEDVDLSEPTFSSCYISWRGDG
KYFVTLGELHTSSSHKKLKVWERDTGALHAASESKAFMGTVLDWMPSGAKIASVYDKKVE
NECPLIVFFERNGLERSSFSINELTDAKVEILKWNCSSDLLAAVVRSETFDSVKIWFFSN
NHWYLKQEIRYLREDGVKFMWHPTKPLQLICWTLGGEVTVNSFVWVTAVMENSTALVIDE
SKILATPLSLSLMPPPMYLFNLKFSSTIRDIAFYTKNSKNLLAAFLSDGCLCVAELPPLD
TWEELEGKELSVDASSSETIFGSFVHLIWLDAHILLGVSHFGFSHSNYFSQTPSSKDMLH
GYYLQEIELLCSEDHVPGLGTCSGWHAKITNQIPLDGLVIGLAPNPTKKCSAFVQFDGGK
VFEYIPNLGIMEGAPKTEDMSLSSSCPWMSVVPVGDSGSSRPLLFGLDDNGRLHVGGKII
CNNCRSFSFYSNSADLAITHLILATKQDLLFVIDIDDILDGKLEVKYENFIHAGNKRREE
DNRNFITIWERGAKVIGVLHGDEAAVILQTARGNLECIYPRKLVLASIINALVQSRFRDG
LLMVRRHRIDFNVIVDHCGWQAFLQSAAEFVRQVNNLSYITEFVCSIKNETITETLYKNY
ISLLCLREAKDVQAGDFKGPNNNNKVSSVLMSIRKALEEQVPESPARELCILTTLARSDP
PALEEALERIKLIREMELLGSDDPRRKSYPSAEEALKHLLWLSDSEAVYEASLGLYDLHL
AAIVALNSQRDPKEFLPFLQELERMPVHLMRYNIDIRLRRYESALKHIASAGDAYYADCL
NLMKENPQLFPLGLQLITDPAKKKEVLEAWGDHFSDEKCFEDAATTYLCCSGLEKALKAY
RACGNWGGVMTVAGLLKLGKEEIVQLANELCEELQALGKPGEAAKIALDYCGDVKSAINL
LVSARDWEEALRVAFMHRCDDLISEVQNASLECATLLIGEYEEGLEKVGKYLARYLAVRQ
RRLLLAAKLQSEDRSINDLDDDTASEASSSFSGMSAYTTGTRKGSAASISSSTASKGRGM
RRQRNRGKIRAGSPGEEMALVEHLKGMYLTPGAERELKSLLVSLVVLGKEEMAKKLQRTG
EAFQLSQMAAVKLAEDTMPNDNIDEYAYTLENYIQKLRNEQQSDAFVWRSKVLLSS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgaagctttattcagatctctctctgaatctggagttgagatcagccgaa
gaagttgtctctttctctgcgttcgatattgaacgcaaccgcttggtttttgcttcttcc
gataatttcatatacaccacgcagcttccttcatcacaaaatgaaagggtatggggcaaa
acctcttcatattccaaggttgagcctattgatttggaacctggggacttcattactgcc
tttgattatctcatggagaaagaagcacttatagtgggaacttctagtgggcttcttttg
ctgcataatgtggatgataatgcgatagaagttgttggtagggtggagggtggtgtcaag
tgcatttcgccaagcccagatggagatctacttggtataataactggttttgggcagata
gtagtgatgactcatgattgggatgtgttgtatgagaatacgcttgatgatctgcctgaa
gatgttgacttaagtgaaccaaccttttcttcctgttatatttcttggcgtggtgatgga
aaatactttgtgacgctgggggaattgcacacttcttcctcacacaagaagcttaaggtt
tgggaaagagatacaggggcgctgcatgctgcttcagaatcaaaggctttcatgggaaca
gttttggattggatgcctagtggagctaaaattgcttctgtttatgacaagaaagttgaa
aatgagtgtcccttaatagttttctttgagaggaatggattggaaagaagctcttttagc
attaatgagctaactgatgcaaaagtagaaattttaaagtggaattgcagttcagatctt
cttgcagctgttgttagatctgaaacatttgactctgttaaaatatggttcttcagcaat
aatcattggtacctgaaacaagaaattagatacttgagggaggatggagttaaattcatg
tggcatccgacaaagccactgcaactgatttgttggactcttggtggagaagtcacagtc
aacagctttgtctgggttacagctgttatggagaactcaacagcattagtaattgatgag
tccaagatactagcaacccctctttccctttctctaatgccaccaccaatgtatttattt
aacctaaagttttcaagtactattagggacattgctttttataccaagaattctaagaat
cttttggctgcatttttgtcagatggatgtttgtgtgttgcagagcttcctcctcttgat
acttgggaagaactggaagggaaagaattaagtgttgatgcctcctcttctgaaacaata
tttgggtcatttgtacatctcatatggttggatgcgcatatacttcttggtgtttctcat
tttgggttcagtcacagcaattacttttcacaaactccatctagcaaggatatgcttcat
gggtattatttgcaggaaattgagcttttgtgttccgaggatcatgtcccaggtttggga
acctgctcaggttggcatgcaaagatcaccaatcaaatacctctagatgggcttgtaatt
ggccttgctcctaatcccacaaaaaagtgttcagcatttgttcagtttgatggtggcaaa
gtctttgaatatataccaaatttaggcatcatggaaggagctccaaaaactgaggatatg
agtttgtcatcatcttgcccttggatgagtgtagttcctgtgggtgacagtggatcatca
aggcctttgctttttgggcttgatgacaatggtaggctgcatgttggtgggaagataata
tgtaacaactgcagaagtttctcattttactcaaattcggctgatctagcgataacacat
ttgattcttgcaactaaacaggatttactctttgttattgacattgatgacattttggat
ggaaaattggaagtaaaatatgaaaacttcatccatgctggtaataaaagacgcgaagaa
gataatagaaactttataactatatgggaaagaggtgctaaagttattggtgtccttcat
ggagatgaagctgctgttatattacaaacagctcgaggaaacctagaatgcatctatcca
agaaaattggtcctggcctcaataattaatgctttggttcaaagtcgtttcagagatggg
ctactcatggtgaggcggcataggatagatttcaatgtcattgtcgaccattgtggttgg
caagcctttctccagtcagctgcagagtttgtcaggcaggtaaataatctgagctacatc
actgagtttgtttgttccatcaagaatgagactattacagagactttatacaaaaattat
atatccctactgtgcctgagggaggctaaagatgtccaagctggagatttcaagggtcca
aataataataacaaagtttcttcagttctgatgtctataaggaaggctcttgaggaacaa
gtaccagaaagtcctgcaagggagctttgcattctgactactctagctcgaagtgatccc
ccagctcttgaagaagcattggagagaataaaacttatccgggaaatggaactattaggt
tctgatgatccacgtagaaagtcttacccttctgcagaagaggctctgaagcatcttttg
tggttgtctgattctgaggctgtctatgaagcttctttaggcctttatgatttgcacctt
gcagctattgtggcattgaactctcaacgggacccaaaagaatttcttccctttcttcaa
gaactggaacgcatgcctgttcacttgatgcgatataatatcgacattagattgcgcagg
tatgagagtgctctcaaacacatcgcttctgcaggggatgcttattatgcagattgtttg
aacctcatgaaggaaaatccccaactttttccattgggacttcaactgatcactgatcct
gccaagaaaaaagaagtgcttgaggcctggggagatcattttagtgatgaaaaatgcttt
gaagatgctgctactacttatttgtgctgctctggtttggagaaagctttgaaggcatat
cgtgcatgtggtaattggggtggtgtaatgacggttgctggtctccttaaattgggaaaa
gaagagattgtgcaactggcaaatgagctttgtgaagaactccaggcacttggtaaacca
ggggaagctgccaaaattgctctggattactgtggagatgttaaaagtgctatcaattta
ttggtcagtgcgcgagattgggaggaggcactaagggttgcgtttatgcacaggtgtgat
gatttaatctcagaagtgcagaatgcatctctggaatgtgccactctgctcattggtgaa
tatgaggaaggtctggagaaagtaggaaagtacttagcccgctacttagctgttcggcag
agaagattactacttgcagcaaagcttcaatcagaagaccggtcgataaatgatcttgat
gatgatactgcttcagaagctagcagtagtttcagtggaatgagtgcttacaccacaggg
acaaggaaaggctctgctgcttccattagttcaagtacggcaagcaagggaagaggaatg
aggcgtcaaaggaatagaggaaaaatccgtgctggaagccctggtgaggagatggctctg
gtagagcatttgaagggcatgtatcttacccctggagcagagcgtgaacttaaatctctg
ttggtttcccttgtggtacttggcaaggaagaaatggcgaagaagctacaacgaacagga
gaggcctttcaactgtctcaaatggcagcagtcaaactagctgaagatacaatgcctaat
gacaacatagatgagtatgcatatactttggagaactacatacagaaattaagaaatgaa
cagcagtcagatgcttttgtttggcgatctaaagtgctgctttcttcataa
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integrated database retrieval system
