KEGG   Vitis vinifera (wine grape): 100248166
Entry
100248166         CDS       T01084                                 
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3
  KO
K15216  RNA polymerase I-specific transcription initiation factor RRN3
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100248166
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    Transcription initiation factors
     100248166
SSDB
Motif
Pfam: RRN3
Other DBs
NCBI-GeneID: 100248166
NCBI-ProteinID: XP_010649342
UniProt: F6I0C5 A0ABY9BV22
LinkDB
Position
4:join(25586428..25586541,25586951..25587034,25587150..25587221,25587308..25587379,25587471..25587707,25589121..25589231,25589315..25589428,25593939..25594064,25594186..25594254,25594432..25594538,25595989..25596072,25596171..25596258,25596857..25596976,25597223..25597407,25597977..25598277)
AA seq 627 aa
MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD
EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN
YLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPI
VIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQ
DDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLE
SCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFV
CSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDINPKAHQV
FYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQA
KAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMI
RTTYDDGEDSSDEEPAEDYEASHPDDVMNDDAMARSYDSHDLELDEFDHSMNKMSITPKN
SLYYRFGDELKVQMPSRIRPSTSPESL
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgggagtggaattagcaaccgatagagctggatttcatgaaatggaagaagttaatttc
agtgattcggagttagtctatcatgtcagacacgctcttcaatcagtccccttgggtgat
agtgacagttatgaccagctgattggggtactgcaccataaggaacgccttgctcctgac
gaggtggctctgttagtgacgagtttaaaggccctatctggagcagtttcttgtatagat
atggttcaccataagtctttgctttcttctatttttggaatgagcctctggaactatgga
cctgatgtaatggatgcgttgcttgaactaattttatccttggctgcttctagtgggaat
tatcttgattgttctttggatatgcttgtcagcaactttatgcccccttattctttgcta
gattttctgaagcagccacgtggtcttgcaaggaaagaccaagttctttcacgtgtgcat
tcaacattgaaggatattgctgatctggtgcctctagccccctcaagactagttccaata
gtaatccagagaatgcctaatgtgtttacgaaggaacctttgattatgatatatgtggag
aacatgttaaggttggagggtggtgcaattcgagaacttgttgggaacatgatgcttgtg
gcactgatggacaggctggtagacttggatgtagagattgcatgggaggaagtcttacaa
gatgactgcagcaaaggcatatttgagatggagctagaagacatggaggagcctgcagat
gatgttgaaaatgatggtggtgagcttcatagaggatctttaagtcgaaagagtttaggg
ggaaatttaattgctgaaaaattagatagcttgatggtgctaactttcgaacatcttgaa
tcttgtgaagcgggtggccgtttgattgaggtatttgaaactctcgtactatcatttcag
acaactgttttgaatgcattcaagtcaaaatttgctcagtttgtgatgttctatgcctgt
gctctcgaccctgaaaattgtggtgtgagatttgctagggtgcttgcagatttttttgtt
tgcagtacttttccaccgcttaacagaatgagtgctgttgcttaccttgcaagttatttg
tcccgtgggaagtttctgacagcctcctttgttgctaatatattggaaaggctggtggtt
tggtgtttggaatattgcaaaatccatgatggtgacataaatcctaaagctcatcaagtt
ttttattctggatgtcaggccatcatgtatgtgctctgcttccgaatgaggtcaatgatg
aatgttcctcatctcagatcacagcttctccttttgcctctggagacaatcttgaagcat
ccattaagtccattgaaggtatgcctaccatccatagtggaggaattccttcgccaggca
aaagcagctcggttattcaccgtgtcagagacctttatttttagtgacctgttggagtca
gaactttccagggcttttggtgggattgaaaggcttgacatgttcttcccattcgaccca
tgtttgctgaaaaaatgtgacaggttcatcaggccaaattttgtgtactggtcaatgatc
cgaactacttatgatgatggagaagatagcagtgatgaagaacctgctgaggattatgag
gctagtcatccagacgatgttatgaatgatgatgcaatggctagaagctatgatagtcat
gaccttgaacttgatgagttcgaccactcaatgaacaaaatgtccatcacacccaagaat
tctttgtattacaggtttggagatgaattaaaggtacaaatgccctcaagaatcagaccc
tctacaagcccagagtcattatga

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