Vitis vinifera (wine grape): 100248175
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Entry
100248175 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100248175 isoform X1
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100248175
Transfer RNA biogenesis [BR:
vvi03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
100248175
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
100248175
NCBI-ProteinID:
XP_002277955
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All DBs
Position
13:join(27826166..27826368,27826457..27826583,27829476..27829603,27829688..27829757,27829860..27829962,27832348..27832465,27832700..27832781,27833807..27833868,27845016..27845088,27845181..27845264,27846409..27846489,27854114..27854284)
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AA seq
433 aa
AA seq
DB search
MMKSAGYTLTASFNPIHSIILKNHRRLSLNILYGNSAKSKNSTAYIRKHQLHTKVVMVAG
QYLPPWFSVAPMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQ
HPIVLQIGGNNLDNIAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAE
AMSVIAANSDVPVSVKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISP
ADNRKIPPLKYEYYFGLLRDFPDLRFTINGGINCVDEVNAALRQGAHGVMVGRAAYHNPW
YTLGHVDSAVYGAPVSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLLHFFYSEP
GNGLWKRKADAAFFHCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANLSDLLPLP
YETSEQEQEVLYA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtctgctggatatactttgactgcttcctttaatcctattcattctattatc
ctaaaaaaccatcgcagattgtcattaaatatattatacgggaattcagctaaatcaaag
aactcaactgcctatattcggaagcatcaactacatacaaaagttgtgatggttgccggg
cagtatcttcctccttggttcagtgttgctccaatgatggattggacaaataatcattat
aggactcttgcccggctgatatctaaacatgcatggctctacacagagatgattgctgca
gaaacaattgtttatcaggaaaagaatttggacagattcttggaattttctccagaccaa
catcctattgtccttcaaattggtgggaacaatttggataacatagccaaagccactgaa
cttgctaattcttattgctacgatgagataaatcttaattgtggatgccctagtccaaag
gtagctggacatgggtgcttcggtgtgcgtcttatgcttgatccaaagtttgttgccgag
gccatgtcagtaattgctgccaactcagatgttcctgtcagtgttaaatgccgaattggt
gttgatgatcatgattcttataatgagctctgtgattttatttataaggtttcctcacaa
tcaccaacgagacatttcatcattcattcacgtaaggcactgctcaatggcatcagccca
gctgacaaccgaaaaatcccacccctaaaatatgagtattattttggtctcttgcgtgac
tttccagacttaagatttacaataaatggaggcataaattgcgttgatgaggtcaatgca
gcactaaggcaaggagctcatggggtaatggttggacgtgctgcctaccataacccttgg
tatactctgggccatgttgattctgcagtttatggtgcaccagtcagtgacctctcacgc
cgtcaggtccttgaacagtatcaggtatatggggattctgttttggaaaaatatggacct
catagaccaagtattcgggaagtggttaagcctttacttcattttttctattcagagcct
ggaaatggtctatggaagcgcaaagctgatgctgctttcttccattgtaagacaatcaag
tcctttcttgaggagactcttgtagcaatacctgactctgtcttggatgcacctgttgct
aaggcgccatctggtcgtgaagatctttttgctaatttgagcgatttgctgcctcttcca
tatgaaacaagtgaacaagaacaagaggtactatatgcttaa
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