Entry |
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Name |
|
KO |
K12843 | U4/U6 small nuclear ribonucleoprotein PRP3 |
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Organism |
vvi Vitis vinifera (wine grape)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100248403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:vvi03041]
100248403
Spliceosome [BR:vvi03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100248403
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
13:complement(join(2095195..2096068,2096644..2096804,2096891..2097085,2097310..2097783,2097974..2098258,2100155..2100814))
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AA seq |
882 aa
MDRSSEKEKSNRRNRESTKDHRDRNRDNRDSRENREHKHRSKEDDEDHRHHHSGGGGDKH
RSEKRSSRDDSKHRDADRHRSSDRGSKRERSHEREGSRDRAADEEVKREREGERSHDSAH
SHKRKERGESEDRGDGGEKRIRVSTERRERRRFEDRVEDVKESNGVERRERRKFEDRVKE
EDLGGFDEVKNVNFDEKSVKKEESEELGDAASNGSGSIGNGVVPEPLNMAPRLVPETSLA
PSLPPPTKVSSISTTNENKGVSITRSHEVPGKSSTDGTTSAAGKSGNLSLDALAKAKKAL
QMQKELSEKLKKIPLLNKGASPSSDGSPQLKPKEEVTLPSSTTGKLLGSVPLTTATEAVS
LVAMPSTSTLPAAAAASVMPSASGVGALAGLTSMPNFEAVKRAQELAAKMGFRQDPEFAP
LINMFPGQMPTDVAVQQKPAKAPVLRLDALGREIDEHGNVVNMPKLNNLSTLKVNINKQK
KDAFQILKPELDVDPESNPHFDSRMGIDKNKLLRPKRMNFQFVEEGKWSRDAEIIKLKSQ
FGEAQAKELKAKQAQLARAKAEPDINPNLIEVSERVIIKEKPKDQIPEVEWWDVPFLHSG
TYGDTDGGITEDKLKMDKITIYLEHPRPIEPPAEPAPPPPQPLKLTKREQKKLRTQRRLA
REKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEMEIRSAAAEREQAHVDRN
IARKLTPAERREKKERKLFDDPNTLETIVSVYKINDLSHPQTRFKVDINAQENRLTGCAV
ISDGISVVVVEGGSKPIKRYGKLMLKRINWAAAVENEDDDEDENEKPLNSCVLVWQGSVA
KPSFNKFNFHQCRTEAAARKIFSDAGVGHYWDLAVNFSGDQI |
NT seq |
2649 nt +upstreamnt +downstreamnt
atggataggtcttctgagaaagagaaatcgaacagacgaaacagggagtccaccaaggat
cacagagatcgcaatcgtgataatcgcgacagccgcgaaaatcgagaacacaagcaccgt
tccaaggaagacgatgaggatcaccgccatcaccacagcggcggcggcggcgacaagcac
cgaagcgagaaacgttcttccagagacgatagcaagcaccgagacgccgatcgccaccga
tcctccgatcggggatcgaagcgcgagagatcgcacgagagggagggcagtagagatagg
gctgccgacgaagaggtgaagagggagagggagggggagaggtctcatgattcggcgcat
tcgcataagaggaaagagcgcggggagagtgaggacaggggcgatggcggtgagaagagg
attagggtttcgacggagaggagggagaggaggcggttcgaggatagggttgaggatgtg
aaggaatcgaatggagttgagcggagagagaggaggaagttcgaggatagagtcaaggaa
gaagatttgggaggttttgacgaagttaagaatgtgaattttgatgagaaaagtgtgaag
aaggaagagagtgaggagcttggtgatgccgcatctaatgggagtggttcaattgggaat
ggtgttgttccggaaccactcaatatggcaccaaggcttgtacctgagacctctttggcc
cctagtctccctcctcctaccaaggtatcttcaatttctaccacaaatgaaaataaggga
gttagtattaccagatctcatgaggttcctggaaaatctagtacagatgggacaacttca
gctgctggaaaaagtggaaacctatcccttgatgctttagcaaaagctaagaaagcttta
cagatgcagaaggaattgtcagaaaagcttaagaagattcccctgttgaacaagggtgct
agtccaagctcagacggtagcccacagttgaaacctaaggaagaggttacattgccatct
tctactactggaaaactgcttgggtctgtccccttaactactgccactgaggctgtctcc
ctggtggcaatgccaagcacatcaactttacctgctgctgcagcagcttctgtgatgccg
tctgcaagtggcgttggtgctcttgctgggcttacatccatgcccaactttgaagccgta
aaacgtgctcaagagcttgctgccaagatgggatttcgccaggacccagagtttgctcct
cttataaacatgtttcctgggcagatgccaacagatgttgcagtccagcagaagcctgct
aaggcccctgtacttcgcttggatgcattgggtagggagatagatgagcatggaaatgta
gttaatatgcctaagctaaacaatctcagcaccctaaaggtcaacatcaacaagcagaaa
aaggacgcattccaaattcttaaacctgaattagatgtggatccggagtcaaatcctcat
tttgattcaaggatgggtattgataaaaataagcttttgaggcctaagaggatgaatttt
cagtttgtagaggaaggtaaatggtcaagagacgcagagattattaagttaaagagtcaa
tttggagaggcacaagcaaaagagctaaaggcaaagcaagcacagctggcaagggccaag
gcagagcctgatataaatccaaatttgatagaggtatcggaaagagttatcatcaaagaa
aaaccaaaggaccaaattcctgaagttgagtggtgggatgtgccttttttgcattctgga
acttatggcgacactgacggtggtataactgaagataaactaaagatggacaagatcact
atatatctggaacacccgcgtcctattgagcctcctgctgagcctgctccacccccacct
caacccctaaagctaactaagagggagcagaagaaactccgaacacagcggcgtctggca
agggagaaagatagacaggaaatgataagacaaggcctcattgaaccaccaaaaccaaaa
gttaagatgagcaatctcatgaaagttcttggctctgaagcaacccaagatcccaccagg
cttgaaatggaaattcgaagtgcagctgctgagcgtgaacaagctcatgttgacaggaat
attgcacgcaagctcacaccggctgaacgccgggaaaagaaagaaaggaaactttttgat
gacccaaatacactggagactatagtttctgtgtacaagattaatgacctttcacaccct
cagacccgttttaaggttgatattaatgcccaagagaaccgtttgactggatgtgctgtg
atttcagatggtattagtgttgtggttgttgaaggtgggagcaaacccatcaaaaggtat
gggaagcttatgcttaagcgtataaactgggcagcagctgtggaaaatgaagacgacgat
gaagatgaaaatgagaagcctctcaacagttgtgtgttagtatggcagggaagcgtggct
aaaccaagcttcaataagtttaattttcaccagtgcaggactgaagctgcagcacggaaa
attttttctgatgctggcgtgggtcactattgggatcttgctgttaacttctcaggtgac
caaatataa |