KEGG   Vitis vinifera (wine grape): 100248422
Entry
100248422         CDS       T01084                                 
Name
(RefSeq) GTP-binding protein YPTM2
  KO
K07874  Ras-related protein Rab-1A
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100248422
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100248422
   04031 GTP-binding proteins [BR:vvi04031]
    100248422
Membrane trafficking [BR:vvi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    100248422
 Autophagy
  Other autophagy associated proteins
    100248422
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100248422
  Exosomal proteins of other body fluids (saliva and urine)
   100248422
  Exosomal proteins of colorectal cancer cells
   100248422
GTP-binding proteins [BR:vvi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    100248422
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 SRPRB Gtr1_RagA FeoB_N LANC_like Septin ABC_tran AAA_29 AAA_16 Dioxygenase_N AAA_22 AAA_7 AAA_5 TniB
Other DBs
NCBI-GeneID: 100248422
NCBI-ProteinID: XP_059589938
LinkDB
Position
2:complement(join(6247518..6247614,6247854..6247957,6248069..6248224,6248324..6248395,6248838..6248885,6248981..6249028,6249812..6249884,6251730..6251743))
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMN
TARPPTVQIRGQPVNQKSGCCSS
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcccgagtatgattaccttttcaagcttttgctcattggagattctggtgttggc
aaatcatgtctcctcctgaggtttgctgatgattcatatctcgagagttacataagcacc
attggggttgactttaaaattcgcactgtggaacaggatggaaagaccatcaaactgcaa
atttgggacactgctgggcaagaacgttttaggacaatcactagcagctactatcgtgga
gcacatggaattattgtggtttatgatgtgacggatcaagaaagcttcaacaatgtcaag
caatggttgaatgaaattgaccgctatgcgagtgagaatgtaaacaagcttctagttgga
aacaagtgtgacctcacagcaaacaaggttgtgtcttatgagacagccaaggcatttgct
gatgaaattggaatccctttcatggaaacaagtgccaaaaatgccaccaatgtagaacag
gctttcatggccatggctgctgagatcaagaacaggatggctagccaaccagccatgaac
actgccaggcctccaacggtgcagatccgaggacagcccgtcaaccagaagtctggttgc
tgctcttcttga

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