KEGG   Vitis vinifera (wine grape): 100249027
Entry
100249027         CDS       T01084                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100249027
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100249027
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100249027
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100249027
  Exosomal proteins of colorectal cancer cells
   100249027
  Exosomal proteins of bladder cancer cells
   100249027
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EML Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_NWD2_C PROPPIN Beta-prop_WDR19_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_RSE1_2nd Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 100249027
NCBI-ProteinID: XP_002281279
UniProt: A5BV59
LinkDB
Position
17:join(2978311..2979192,2980495..2980596)
AA seq 327 aa
MAETLVLRGTMRAHTDMVTAIATPIDNSDMIVTSSRDKSIILWHLTKDDKTYGVPRRRLT
GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSVDNRQI
VSASRDRTIKLWNTLGECKYTIQDADAHSDWVSCVRFSPNNLQPTIVSASWDRTVKVWNL
TNCKLRATLAGHGGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAIIHAL
CFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEDTTTTAKKKGKIIYCTS
LSWSADGSTLFSGYTDGVVRVWGIGRY
NT seq 984 nt   +upstreamnt  +downstreamnt
atggccgaaaccctagttctccgcggtacgatgagagcccacaccgatatggtgacggcc
atcgccaccccaattgacaactccgacatgatcgtcacttcctcacgagacaagtccatc
atcctctggcacctcaccaaggatgacaagacctatggcgtcccccgtcgccgccttacc
ggccattcccattttgttcaggacgttgtcctctcctccgacggccagttcgctctttcc
ggaagctgggacggtgagctccgcctctgggatctcgctgccggcacctccgcccgtcgc
ttcgtcggtcacaccaaggacgtcctttccgtggctttctctgttgataaccgccagatc
gtgtcggcttcgcgtgaccgcaccatcaagctctggaacactcttggtgagtgcaagtac
accatccaggacgctgatgcacactccgattgggtgagctgcgtccgattcagccctaac
aacctgcagccgacgattgtgtctgcctcttgggatcggacagtgaaagtctggaacttg
acgaactgcaagctccgggccactctggccggtcacggcggctatgtgaacacagtggcg
gtgtcaccagacgggtccctgtgcgcgagtggaggcaaggatggagtgattcttttgtgg
gatttggccgagggaaagaggctatactcgctcgatgcaggagcgattattcacgctttg
tgtttcagccctaataggtactggctttgcgctgctacggagcagagtatcaagatctgg
gatttggagagcaagagcattgtcgaggatttgaaggttgatctcaagaccgaggctgaa
aagagcgaagataccaccactactgccaagaagaagggaaagatcatatattgcacaagc
ttgagctggagcgcagatggaagcacattgtttagtgggtacacggatggtgtagtcaga
gtttggggaattggccgttactag

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