KEGG   Vitis vinifera (wine grape): 100249117
Entry
100249117         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100249117
  KO
K03267  peptide chain release factor subunit 3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100249117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100249117
   03012 Translation factors [BR:vvi03012]
    100249117
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     100249117
Translation factors [BR:vvi03012]
 Eukaryotic type
  Release factors
   100249117
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 EF-G_D2
Other DBs
NCBI-GeneID: 100249117
NCBI-ProteinID: XP_002280982
LinkDB
Position
17:join(3057673..3057676,3058238..3058279,3058407..3058481,3069468..3069524,3077555..3077650,3078666..3078777,3079317..3079362,3079493..3079564,3080546..3080608,3080701..3080855,3080932..3080996,3089987..3090137,3091854..3091959,3092054..3092189,3094489..3094553,3094696..3094860,3095179..3095251,3095339..3095394)
AA seq 512 aa
MDIEEEIRSLQLDSSEDNNGVVNPEAAKLEQIEESDKMDVDLNNEAHKESQSVHVEPSKV
KEISAPEDIEGPEDAEGYKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKE
AKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISG
ASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWSKE
RYDEIESKMIPFLRSSGYNVKKDVHFLPLSGLVGLNMKTRVDKSLCSWWNGPCLFEALDA
IDVPFRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSLLVMPNKVQVKVFAVYCDE
NKVKLAGPGENVRVRLSGIEEEDIISGFVLSSIAKPIPAVYEFVAQLQILELLDNAIFTA
GYKAVLHIHSIVEECEIIELLQQIDPKTKKPMKKKVLFVKNGAVVLCRIQVNNLICIEKF
SDFPQLGRFTLRTEGKTVAMGKVMDLNSASSI
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggatatcgaagaagaaatccggtcattgcagcttgattcatcagaagacaataatggg
gtggttaatccggaagctgcaaagctggaacagattgaagaatctgataagatggatgta
gatttgaacaatgaagctcacaaagagtctcagtcggtacatgtggagccatcaaaagtt
aaggaaatttctgctccagaagatattgaaggtccagaagatgcagaagggtataagaag
cggcatctgaatgttgtatttattggccatgtggatgcgggcaagtccacaactggaggt
cagatattgttcctcagtggtcaggtggatgatcgtacaatccaaaaatatgagaaagaa
gcaaaggataaaagtcgagagagctggtatatggcatatataatggacaccaatgaagag
gagagggttaaggggaaaacagttgaagttggcagagcacattttgaaacagaaacaacc
agatttacaattttggatgcaccgggtcacaaaagttatgtcccaaatatgatcagcggt
gcgtctcaagctgatataggtgtacttgttatatctgctcggaagggagaatttgaaact
gggtatgagagaggtggacagacccgtgagcatgtccaacttgcaaagacattgggtgtg
tctaagctgcttgttgttgtaaataagatggatgatcctactgtgaactggtcgaaggaa
aggtatgatgaaattgagtcaaagatgattccattcctaagatcttcaggctacaatgta
aaaaaagatgttcattttcttccattatctggtctggttggtttgaacatgaaaacaaga
gtggacaaaagtttatgttcttggtggaatggtccatgcctttttgaagcccttgatgcc
attgatgtgcctttccgagatcctaaaggcccctttaggatgcctattattgataaattc
aaagacatgggaactgttgttatgggcaaagtagagtctggtagtgtgcgtgaaggcgac
agcttgttggtcatgccaaataaggttcaggtgaaagtttttgctgtgtactgtgatgag
aataaagttaaacttgctggacctggtgaaaatgtacgggttagattatctggaattgaa
gaagaagacataatatcaggatttgtcctgtcaagcattgcaaaaccaatacctgcagtg
tacgagtttgttgcccagctgcagattcttgaattgctggataatgcaattttcactgct
ggttataaggctgtcttgcacattcattctattgttgaggaatgtgagattattgaactg
ctgcagcaaattgatccgaagacaaagaaacctatgaaaaagaaagtcctattcgtaaag
aatggtgctgttgtactgtgccgcattcaggtgaataacttgatttgcattgaaaaattc
tctgatttcccacagcttggaaggttcactcttcgaactgaaggaaaaactgttgctatg
gggaaagttatggatcttaattctgctagttctatttaa

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