KEGG   Vitis vinifera (wine grape): 100249183
Entry
100249183         CDS       T01084                                 
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
  KO
K06672  cohesin loading factor subunit SCC2
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100249183
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    100249183
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT PDS5 PHD PHD_2 Cnd1 IFRD
Other DBs
NCBI-GeneID: 100249183
NCBI-ProteinID: XP_010661137
LinkDB
Position
14:complement(join(30416405..30416629,30417124..30417249,30417363..30417455,30417938..30418307,30418394..30418687,30418764..30418897,30419340..30419573,30419642..30419746,30419831..30419992,30424276..30424384,30424818..30424987,30426465..30426617,30426706..30427005,30427480..30427647,30427755..30427913,30428043..30428093,30428170..30428380,30428460..30428992,30429071..30429502,30429645..30429831,30429922..30430012,30430208..30430319,30430481..30430588,30439267..30439523,30439653..30439746,30439820..30439950,30448018..30448127,30448677..30448936))
AA seq 1792 aa
MQRLESSSSMSNSGSSSLRGIGLSNTIHSEVAPCLPLPSLPVFCGAYDQELRLFDEPRNA
RSLNRRDVISQASRIADLLRETDISYLNLRDDECSFPYGFVEPLVLYDEVVRCNPEAFEY
ITPGHIKEQICSRTVSEKKPIEQNVPITSQVQRDGGNHSHQSDYILNEKSTSSRKPKVKK
KGSDDFLPSAGPDPYDLQDATIGNFSEMLEDFCGRAEIPSDDRDEAEWLSMPLADLKILV
NEIISIRAKKLLNLVPVDILVRLLRVLDHQIHRAEGLSVDECEHSDTDAVSSVFCALESI
HAALAVMTHNDMPKQLYKEEIIERILEFSRHQIMDIMSACDPSYRALHKPSENGVLEGED
DEELDADFGSASKKRRKSVKAKKSAANKVSTAVNAILQKLCTILGFLKDLLLVERLSDSC
VLQLVKTSFTTFLVDNIQLLQLKAISLICGIFYSYTQHRTYVIDETLQLLWKLPFSKRAV
RAYHLPDQEQRQIQMITALLIQLIHFSANLPEALRQASNGNTILDVSIDSSYPIKCHEAA
TEACCLFWTRVLQRFTTVKTQDASELKVMMENLVMDLLTTLNLPEYPASAPILEVLCVLL
LQNAGLKSKDISARSMAIDLLGTIAARLKHDAVLCSRDRFWILQELVGGDSVDQTHPKDV
CSVCMDGRVERALFVCQGCHRFFHADCMGVREHEVPSRGWYCQFCLCKKQLLVLQSYCKS
QCKDDEKRNRARSDKNSEASDPITKVEIVQQMLLNYLHDAGSSDDVHLFVRWFYLCLWYK
DDPKSQQKFIYYLARLKSKAIVRDSGTAFSLLTRESVKKITLALGQNNSFSRGFDKILHL
LLASLRENSPVIRAKALRAVSIIVEADPEVLCEKRVQVAVEGRFCDSAISVREAALELVG
RHIASHPDVGLKYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTSACNEIISRV
SDEESSIQDLVCKTFYEFWFEEPSGSQTQFFGDGSSVPLEVAKKTEQIVEMLRKMPNHQL
LVAVIKRNLALDFFPQSAKAVGINPVSLASVRKRCELMCKCLLERILQVEEMNSEEVEVC
TLPYVLVLHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQVDNRVVAKLLESIIFIIDAVL
PLLRKLPQSILEELEQDLKQMIVRHSFLTVVHACVKCLCSVSKVAGKGASVIEYLIQVFF
KRLGAIGVDNKQQVGRSLFCVGLLIRYGNSLLSSCSDKNVYVTSSLNMLKKYLQVDDFFV
KVRALQALGFVLIARPEYMLEKDVGKILEATFSSSSDAHLKMQALQNMYEYLLDAESQMG
PDKTSNDVVNYSVEGGQSVPVAAGAGDANICGGIVQLYWDSILARCLDVNEHVRQSALKI
VEVVLRQGLVHPITCVPYLIALETDPQEVNSKLAHQLLMNMNEKYPAFFESRLGDGLQMS
FVFIQSTSGCSPGNSNPKVQTKVPGNMKGKSDGGSFAYARLGVSRIYKLIRANRVSRNKF
MSSIVRKFDTPSWNHSVIPFLMYCTEILALLPFTSPDEPLYLIYAINRVIQVRAGTLEAN
MKALSLHFSQRDVHKIHHENGIAEQEPASQPVSNYTTLMDVNGAAKLEPAGQPDSDHATS
MNLKTYMTCSDSSCDISKDDLQKIQADCLAATALQLLLKLKRHLKIVYSLNDARCQAFSP
NEPLKTGEVLTKQNIPFYITEMHIDSPTTHQELMQRYQEFKSALKEDTVDYSAYTANIKR
KRPAPRRGVKSGRMMGGDDEDEDDDDEDWTGGRRQSNSVRRGNSNRGGRQRL
NT seq 5379 nt   +upstreamnt  +downstreamnt
atgcagcggttggagtcgtcgtcttcgatgagcaattccggcagttcgagtctacgaggc
atcgggctgtccaacaccatacactctgaggtcgcaccttgcttaccgttgccttcgctt
ccagtgttctgtggggcgtatgatcaggagcttcgcttgtttgacgagcccaggaacgca
aggtctttgaatcggcgtgatgtgattagtcaggctagtaggatcgctgatctgctcaga
gagacagatatttcttatctgaatctgagggatgatgaatgttcttttccttatgggttt
gtggagcctttagtcctttatgatgaagtggtccggtgtaatcctgaagcatttgaatac
attactccaggtcatatcaaggagcaaatctgtagcaggacagtatcagaaaagaaaccc
attgagcagaatgtacccattacaagtcaagttcaaagagatggtggcaatcatagccac
cagtctgattatattcttaatgaaaaatccacttcttctagaaaaccaaaagtcaagaag
aaaggaagtgatgacttcttaccatcagctgggccagatccctatgatcttcaagatgcc
accattggaaacttttctgagatgttggaggacttctgtggaagagcagaaattcctagt
gatgatcgtgatgaagcagagtggttatcaatgccacttgctgatcttaaaattcttgta
aatgaaataatatccatccgtgcaaagaaacttctaaatttggttcctgtagatattctt
gtaagactgttgagggttctagatcatcagattcatcgagctgaaggcttgtctgttgat
gaatgtgaacattcagacaccgatgcagtttcatcagttttctgtgctctggagtctatt
catgcagcactagcagttatgacacataatgacatgccaaagcagctttacaaagaggag
atcattgaaagaattctggagttctctaggcatcagataatggacataatgtcagcttgt
gatccttcatatcgtgctttgcataaaccaagtgaaaatggggtgcttgagggtgaagat
gatgaagagctggatgctgactttggttcagcaagcaagaaacgacgtaagagtgtcaaa
gcaaagaaatcagcagctaacaaggtttctactgctgtgaatgccatacttcagaaactg
tgcactattcttggttttctgaaggatttgttgttggtggagcgcctatcagatagttgc
gttctacaactagtgaaaacaagctttacaacattcttagtggataatatccagctcttg
caactaaaagcaataagtttgatatgtgggatattctactcatacacgcagcatcgcact
tatgtgatagatgaaacacttcagctgctttggaagttaccattctcaaagagagcagta
agagcttatcacctacctgatcaagaacagaggcagattcagatgattactgcattgctg
attcaattaattcattttagtgctaatcttcctgaagctttaagacaagcatcaaatgga
aacaccatattggacgtttcaattgattccagttacccgattaaatgccatgaagcagcc
acagaggcatgttgtctcttttggacccgtgtccttcagcgatttacaacagtaaaaact
caggatgcctctgagttgaaagtgatgatggagaatcttgttatggatttgctgacaaca
ttgaatttacctgaatatcctgcttcagctcctattctggaggttctttgcgtcttactg
cttcagaatgctgggctgaaatctaaagacatctctgcacgttcaatggccattgatctt
cttggtacaattgctgcaaggttgaagcatgatgctgttctttgcagcagggatagattt
tggatattgcaagaattggttggtggagatagtgttgatcaaactcaccctaaagatgtc
tgttcggtctgtatggatggaagagttgaaagggcattgtttgtatgtcaaggttgtcat
agattttttcacgcagattgcatgggagtaagagaacatgaagttcctagccgtggctgg
tactgtcagttctgcctctgcaagaagcaacttcttgtcttacaatcatactgcaaatca
caatgcaaggatgatgagaaaagaaatcgtgctcggtcagataagaattctgaagctagt
gatccaattacaaaagttgaaattgttcagcagatgcttttaaattacctgcatgatgct
ggctcttctgatgatgtgcatctctttgttcgctggttttatctttgcctgtggtacaaa
gatgatccaaagtcccaacaaaagttcatttactaccttgctagattgaaatcaaaagca
attgtgcgtgattctgggactgctttctcattgttaactagggagtcggtcaagaagata
acactagcattaggacaaaataattctttctccagagggtttgataagattcttcatttg
ctgttggcaagtctcagggagaactctccagtaattagggctaaggcattacgtgcagtt
agtattatcgtggaagctgatccagaagttttgtgtgagaaacgtgtccaagtggctgtt
gaaggaaggttttgtgactctgcaatatctgtgagagaagcagcccttgaacttgttggt
aggcatattgcttcacatcctgatgttggtttgaagtattttgagaaggttgccgagaga
ataaaggatacaggagtgagtgtacggaaaagagcgatcaaaatcatcagagacatgtgt
acttccaatgctaacttctcagaatttacaagtgcttgcaatgagatcatttctcgtgtt
agtgatgaggaatctagcatccaggatcttgtctgcaagacattttatgagttctggttt
gaagaaccatctggttctcagactcagttttttggtgatggtagttctgttccactggaa
gttgcaaaaaagactgagcagattgttgaaatgttgagaaagatgcctaatcatcaactt
cttgttgctgtcattaagcgcaacttagcccttgattttttccctcaatcagctaaagct
gttgggattaatcctgtctcattggcatctgttcgtaagcgttgtgagttgatgtgcaag
tgcttactagaaaggatattgcaggtagaggaaatgaacagtgaagaagttgaggtgtgc
acacttccctatgtcctggtcttgcatgccttttgtgttgttgatccaaccctgtgtgct
ccagcttctgatccttcccagtttgtagtcactctacagccatatctgaagagtcaggtt
gataatcgagtagttgcaaaactactggaaagtataatcttcataattgatgctgttctg
cccctgcttcgaaagcttccacagagtattctggaagaacttgagcaagacctaaagcaa
atgattgttaggcattctttcttgactgttgtccatgcctgcgtcaagtgcctttgctca
gtaagtaaagtagcaggaaaaggtgcaagtgtaattgagtatcttattcaagtgttcttc
aaacgtttaggggccattggggttgacaacaaacagcaagtgggccgatctcttttctgt
gttgggctgcttatccgctatggtaactctttgctgagctcctgcagtgacaaaaatgta
tatgttacaagcagcctcaacatgttaaaaaaatatcttcaggtggacgatttttttgta
aaggttagggctttgcaggcattaggatttgttttgattgctaggcctgaatatatgttg
gaaaaggatgttggaaaaatattagaggcaacattttcttctagttctgatgctcatctt
aagatgcaagcactgcaaaacatgtacgagtatcttcttgatgcagaaagtcaaatggga
cctgataaaaccagtaatgatgtagttaattattctgtagaaggtggtcagagtgtgcca
gtagctgcaggtgctggtgatgctaacatttgtgggggaatagttcagttatattgggat
agtatcttagcaagatgcttggatgtcaatgaacacgtccgccaatctgccctcaagatt
gtggaagttgtgttacgccagggtcttgttcaccctattacttgtgttccataccttata
gcacttgaaacagatcctcaggaggtgaactcaaagctggctcatcagttgctgatgaat
atgaatgagaagtatcctgctttctttgaaagccgtttgggtgatggccttcagatgtca
tttgttttcatacaatcgacaagtggctgttctcctggaaattcaaacccaaaagtccaa
accaaggtacctggaaatatgaaggggaaatctgatggtggcagttttgcctatgcaagg
cttggagtttctagaatctacaagcttattcgtgcaaaccgtgtctcaaggaacaaattt
atgtcttcaattgttcgaaaatttgatactccaagctggaatcattcagtaattcctttc
ctgatgtattgtactgaaattcttgctttgctaccattcacatcacctgatgagcccctg
tatttgatctatgctattaatcgagttatacaagttagggctgggacacttgaggcaaat
atgaaagccttgagcttacacttttcacagagagatgtccataagattcatcatgagaat
gggattgctgaacaggaaccagcttctcagcctgtatccaactatacaacattaatggat
gtaaatggtgcagccaaactagagccagctggtcagcctgattcagatcatgctacatca
atgaatttgaagacatacatgacatgctcggacagttcttgtgatatatcaaaagatgat
ctgcaaaaaattcaggcagactgtcttgcagccactgcactgcaacttctcctgaagctg
aagaggcatttaaaaattgtgtatagcctcaatgatgcccgatgccaggctttctctcca
aatgaaccactaaaaacaggagaggttctcaccaagcagaatattcccttttacattact
gaaatgcacattgattcgcccaccactcatcaagaattgatgcaaagatatcaggagttt
aagagtgccttgaaggaagatacagttgattactcggcctacacagcaaacatcaagagg
aagcgtccagcccccaggagaggtgttaaatctggtcgtatgatgggtggagatgatgaa
gatgaagatgatgatgatgaagattggacaggtgggaggaggcaaagtaacagtgtcagg
agaggcaacagcaacagaggtggcagacagcggttgtag

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