KEGG   Vitis vinifera (wine grape): 100249277
Entry
100249277         CDS       T01084                                 
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vvi03000]
    100249277
   03036 Chromosome and associated proteins [BR:vvi03036]
    100249277
Transcription factors [BR:vvi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    100249277
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     100249277
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N SSrecog Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 CDC45
Other DBs
NCBI-GeneID: 100249277
NCBI-ProteinID: XP_002282538
UniProt: D7SX63
LinkDB
Position
14:complement(join(29080578..29080708,29080835..29080913,29081885..29082067,29082163..29082261,29082391..29082538,29082620..29082765,29082885..29083082,29083270..29083362,29083457..29083543,29083735..29083843,29084066..29084160,29084249..29084332,29084615..29084751,29085518..29085623,29086794..29086979,29087765..29087818))
AA seq 644 aa
MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN
QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGLNPEEKQLSVSGRNWGEVDLNGNMLT
FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS
EELLNSKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDGGSPTDDSGEEESDASESGGEKEKPSKKESKKEPSVSKASSSKKKPKDG
DEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKM
TAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDSE
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgtcggagggtcatctcttcaacaatatctctctcggcggtcgcggtggaacgaatcca
gggcagttgagggttcatccaggagggatattatggaaaaagcaaggaggtggaaaggct
gttgaggttgacaaatctgatattgtcggggtgacctggatgaaagtcccaagaactaat
cagcttggtgttcgagttaaagatgggttatactacaaattcactggtttccgtgagcag
gatgtcactaatttgaccaattttttccaacattcttgtggattaaacccagaagagaag
cagctttctgtgagtggccgcaactggggagaagttgatttaaatggcaatatgctgact
tttctggttggttcgaagcaagcatttgaagtatctttagcagatgtttcacagacacag
atgcaagggaaaaatgatgtcattttggagttccacgtggatgatacaactggggctaat
gagaaagattcattgatggagataagctttcacataccaaattccaatacccaatttgtt
ggtgatgaaaatcgtcctccagctcaagtattccgtgataaaattatgtcaatggcggat
gttggtgctggaggtgaagaagcagttgttacatttgaggggattgcgattcttacacca
aggggacggtacagtgtggaactgcatttgtcattcctacgcctgcagggtcaggctaac
gattttaaaattcaatacagcagtgtcgttcgccttttcttactacctaagtctaaccag
ccacatacctttgttgttgtgacactggatccaccaatccgtaaagggcagactttgtat
ccacatattgtgatgcagtttgaaacagactatgtggttcaaagtgaattgtcattaagt
gaagaacttttgaatagcaagtacaaggacaagttggagccttcatataagggactcatt
catgaagtcttcaccttgatattgcgtggcttatctggtgccaaggtcacaaaaccaggg
aaattccggagctgtcaggatggttatgcagtgaagtcatcattgaaagctgaagatggt
gttttgtatccactagaaaagagcttcttctttttacccaagcctcctacccttattctt
catgaggagattgactatgttgagtttgagaggcatgctgctggaggctcaaatatgcat
tactttgatcttcttataagactaaagactgaacaagaacatctcttccggaatattcag
aggaatgaataccataatctttttgactttatcagtgggaaaggcttgaaaattatgaat
cttggagatgtccaaaccgcagatggtgttgctgctgttcttcagaatgatgatgatgat
gctgttgacccacatcttgagcggattaagaatgaagctggtggagatgagagtgatgaa
gaggatgaagattttgttcttgacaaggacgacggaggctctcctactgatgattctggg
gaagaggaatctgatgctagtgaaagtggaggcgagaaagaaaagccttccaaaaaggaa
tccaagaaagagccttctgtttctaaggcatcttcgtctaagaagaaacccaaagatgga
gatgaagatggttcaaagaagagaaaacagaagaagaaaaaggatccaaatgcgccaaag
agggctatgtctggtttcatgttcttttcacaaactgaaagggagaatataaagaaaagt
actcctggaattgcattcactgaggtggggagagttcttggtgataagtggaaaaagatg
acagcggaggagaaagaaccctacgaagcgaaagctcaagcagataagaaacgatacagg
gatgaaattagcggctacaagagcaacccacaacccatgaacgtagactccgggaatgaa
tccgacagtgaatag

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