KEGG   Vitis vinifera (wine grape): 100249299
Entry
100249299         CDS       T01084                                 
Name
(RefSeq) ras-related protein Rab7 isoform X3
  KO
K07897  Ras-related protein Rab-7A
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04142  Lysosome biogenesis
vvi04144  Endocytosis
vvi04145  Phagosome
vvi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100249299
   04145 Phagosome
    100249299
   04142 Lysosome biogenesis
    100249299
   04148 Efferocytosis
    100249299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100249299
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100249299
   04031 GTP-binding proteins [BR:vvi04031]
    100249299
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    100249299
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100249299
  Exosomal proteins of other body fluids (saliva and urine)
   100249299
  Exosomal proteins of colorectal cancer cells
   100249299
  Exosomal proteins of bladder cancer cells
   100249299
GTP-binding proteins [BR:vvi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    100249299
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU ATP_bind_1 AAA_16 Septin nSTAND3 RsgA_GTPase cobW AAA_7 AAA_22 NACHT PduV-EutP AAA_24 nSTAND1
Other DBs
NCBI-GeneID: 100249299
NCBI-ProteinID: XP_002279477
UniProt: A0ABY9CBH9
LinkDB
Position
7:join(28460185..28460237,28460337..28460363,28460770..28460869,28460973..28461119,28461216..28461296,28461363..28461508,28461917..28461980)
AA seq 205 aa
MAAPRRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQIDDKLVTLQ
LWDTAGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQADPAEPEVFPF
VVLGNKVDVDGGNSRVVSERRAREWCASRGDIPYFETSAKEDFNVDAAFLCVARVGLSNE
HGQENYFRAISEVVSETEQKGGCAC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggctgcaccaagaagaaccttgctcaaagtcatagtcctcggcgacagtggggtgggg
aagacatcattgatgaatcaatatgtgtacaagaagttcagtcagcaatacaaagctaca
attggggctgattttgtcacaaaggaactgcagattgatgacaaattagtcacattacaa
ctctgggacacagcagggcaggagaggttccagagcttggggtcagcattctacagagga
gcagactgctgtgttcttgtgtatgatgtcaatgtactgaaatcatttgaatcactccaa
agttggcatgaagaattcctcaagcaggcagatccagctgagcctgaggtgtttccattt
gtagtgcttgggaacaaggttgatgtggatggtgggaacagcagggtggtttctgagagg
agagctagggagtggtgtgcttccaggggagacataccatactttgagacttcagcaaag
gaggatttcaatgtggacgctgcatttctctgtgttgctcgagttggattgagcaatgaa
catggacaagaaaattattttagagcaatttcagaagttgtttcagaaacagagcagaag
ggagggtgtgcttgctga

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