Vitis vinifera (wine grape): 100249377
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Entry
100249377 CDS
T01084
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100249377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100249377
Membrane trafficking [BR:
vvi04131
]
Endosome - Golgi transport
Others
AP-4 complex
100249377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
INTS1_R4
HEAT_2
HEAT
HEAT_EZ
PIK3R4-like_middle
PDS5
TOR1L1_N
NPHI_C
HEAT_GCN1
HEAT_GCN1_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
100249377
NCBI-ProteinID:
XP_010644481
UniProt:
F6HJ24
A0ABY9BJU9
LinkDB
All DBs
Position
2:join(20247257..20247823,20248681..20248866,20249808..20250023,20250146..20250256,20260568..20260765,20260867..20260998,20266882..20266938,20267046..20267162,20269937..20270014,20271356..20271499,20272763..20273845)
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AA seq
962 aa
AA seq
DB search
MGSQGGFGNSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRIVEPDIPKRKMKEFIIR
LVYVEMLGHDASFGYIHAVKMTHDDSLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMALHRFYQRSPSSV
THLVSNFRKKLCDNDPGVMGATLCPLFDLIAVDANSYKDLVISFVSILKQVAERRLPKTY
DYHQMPAPFIQIRLLKILALLGSGDRQASENMYTVVGDIFRKCDSTSNIGNAVLYECICC
VSSIYPNPKLLEAAADVISRFLKSDSHNLKYMGIDALSRLIKISPEIAEQHQLAVIDCLE
DPDDTLKRKTFELLYRMTKSSNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPS
NHWFIQTMNKVFEHAGDLVNIKVADNLMRLIAEGFGEDDDTADCQLRSSAVESYLRIIGE
PKLPSAFLQVICWVLGEYGTAGGKYSASYITGKLCDVAEAHSSNDTVKAYAVTALMKVYA
FEIAAGRKVDMLPECQSLIEELSASHSTDLQQRAYELQAVVTLDAHAVEIIMPSDASCED
IEVDKNLSFLDSYVERSLEQGAQPYIPENERSGMINISNFRSQDQHDTSTHTLRFEAYEL
PKTSAPPRISPVSLAPSTELVPVPEPSYPVEMHHVASVPSVSDTGSTELRLRLDGVQKKW
GRPTYSSPASSSSDSTSHKAVNGVTQSDVSSTSTSRTRDSSYDSRSAQAEISSEKKKLAA
SLFGGPSKTEKRPSSTSHKVARSTSPAVEKSQGPKAVASSTTGVVSEKAAPLQQPPDLLD
LGEPTVTSSASSVDPFKQLEGLLDPTQATSAANHGAVDNTKAADIMSMYSEFPPSGQSSV
IANPFTTNAGDANLIPGLSTTNKTGHAKGPNPRDALEKDALVRQMGVTPMSQNPNLFKDL
LG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccagggtggcttcggcaattccaaggagtttttggatctcgtcaagtccatc
ggcgaggctcgatccaaggcggaagaggaccgcatcgtcctccacgagatcgaaaccctc
aagcgtcgaatcgtggagccggacatcccgaagcgcaagatgaaggagttcatcatccgc
ctggtgtacgtggagatgctgggtcacgatgcctccttcggctacattcatgcggtcaag
atgacccacgacgactcccttctcctcaagcggacggggtacttggcggtgactctattt
ttgaatgaggatcatgatttgattatactcattgtcaataccattcagaaggatctcaaa
tcggacaattatttagtggtttgcgccgcgctgaatgcggtttgcaagttgatcaatgag
gagactattcccgcggtgcttccgcaggtggtggagctacttgggcactcgaaggaagcg
gttcgaaagaaggccatcatggccctacatcggttttatcagcgctcaccgtcctcggtc
acgcatctcgtctccaatttcagaaagaagctttgtgataatgatcctggagtcatgggt
gcaacactttgccctctttttgaccttattgcagtagatgccaattcttacaaggatttg
gtcatcagctttgtgagcattcttaaacaagtagctgagcgtagattaccgaagacttat
gactatcatcagatgccagctccattcattcagatcaggttgttgaaaattctggcattg
ctgggcagtggtgatagacaagcaagcgaaaacatgtatactgttgtgggtgacatattc
aggaagtgtgattcgacgagtaacataggaaatgctgttctttatgagtgcatatgctgt
gtttcttctatatatccaaaccctaaattattagaagctgctgctgatgtaatttccaga
tttttgaagagtgatagtcataatctaaagtatatgggcattgatgcccttagtagactg
ataaagataagtccagaaattgctgaacaacaccaattggctgtcattgattgcttagag
gacccagatgatactctaaagcgaaaaacctttgagctactatatagaatgaccaagtct
tcaaatgtggaagtgattgttgatcgtatgattgattacatgataagcattaatgataat
cattacaaaactgaaatagcatctcgatgtgttgaactggcagagcaatttgcaccaagc
aaccattggtttatccagaccatgaataaagtctttgagcatgctggagatttggtcaat
attaaggtggctgataatttgatgcggttgattgcggaggggttcggagaggacgatgat
actgcagattgtcagcttagatcatctgctgtggaatcgtatttacgtatcattggagag
ccaaagcttccgtctgcatttcttcaggttatttgttgggttttgggtgagtatggaact
gcgggtggaaagtattctgcttcctatatcactggaaagttatgtgatgtggcagaggcc
cattcaagcaatgacactgttaaggcatatgctgttacagcgctgatgaaagtatatgca
tttgaaatagcagcaggaagaaaagtggatatgctaccagagtgtcaatccttgatcgaa
gaactatcagcatcccactcaacagatttacaacagcgtgcctatgaattgcaagcagtt
gtcaccctagatgctcatgctgttgagattataatgccatcagatgctagttgtgaagac
attgaggttgataaaaacctttcattccttgacagttatgttgaacggtcattagaacaa
ggggctcagccctatattcctgagaatgagcgttctggaatgataaatattagtaacttc
agaagccaagatcagcatgacacttctacacatacccttaggtttgaggcctatgagctc
ccaaagacttcagcaccaccaaggatatctcctgtttcactcgcaccctcaactgaactt
gttccagtacctgagccatcttatcctgtagaaatgcaccatgttgcatctgtgccatct
gtatcagatacagggtcaacggaactcaggctgcgacttgatggagttcaaaagaagtgg
ggcaggccaacttactcttctcctgcatcgtcttcctcggattctacttcccataaggca
gtaaatggggtcacacaatctgatgtgagtagcactagcacctcaagaacacgtgatagc
tcttatgattctaggagtgcacaagctgaaatttcttcagagaagaagaagcttgctgct
tcactatttgggggtccttcaaaaacagagaaaagaccgtcttctactagccacaaggtt
gcaaggtccactagtcctgctgtggagaagtcccaggggccaaaggcagtggcttcatct
actactggagttgtatcagagaaggcagctccacttcaacaacctcccgacttgcttgat
ctgggtgaaccaactgttactagtagtgcttcatctgtggatccatttaagcaattggaa
gggcttctcgacccaactcaagctacttcagctgcgaatcatggtgctgttgataatacc
aaagcagctgatattatgtcaatgtattcagagttccctccaagtgggcagagcagtgtt
attgcaaatccttttaccactaatgcaggtgatgctaatcttatacctggtttgtcaacc
acgaacaaaactgggcatgctaagggcccaaaccctagagatgccttagaaaaagacgca
ctggtgaggcaaatgggcgtgaccccaatgagccagaatcccaacttgttcaaggatttg
cttggctaa
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