KEGG   Vitis vinifera (wine grape): 100249377
Entry
100249377         CDS       T01084                                 
Name
(RefSeq) AP-4 complex subunit epsilon
  KO
K12400  AP-4 complex subunit epsilon-1
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04142  Lysosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100249377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100249377
Membrane trafficking [BR:vvi04131]
 Endosome - Golgi transport
  Others
   AP-4 complex
    100249377
SSDB
Motif
Pfam: Adaptin_N Cnd1 INTS1_R4 HEAT HEAT_2 HEAT_EZ PDS5 TOR1L1_N NPHI_C HEAT_EF3_N
Other DBs
NCBI-GeneID: 100249377
NCBI-ProteinID: XP_010644481
UniProt: F6HJ24
LinkDB
Position
2:join(20247257..20247823,20248681..20248866,20249808..20250023,20250146..20250256,20260568..20260765,20260867..20260998,20266882..20266938,20267046..20267162,20269937..20270014,20271356..20271499,20272763..20273845)
AA seq 962 aa
MGSQGGFGNSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRIVEPDIPKRKMKEFIIR
LVYVEMLGHDASFGYIHAVKMTHDDSLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMALHRFYQRSPSSV
THLVSNFRKKLCDNDPGVMGATLCPLFDLIAVDANSYKDLVISFVSILKQVAERRLPKTY
DYHQMPAPFIQIRLLKILALLGSGDRQASENMYTVVGDIFRKCDSTSNIGNAVLYECICC
VSSIYPNPKLLEAAADVISRFLKSDSHNLKYMGIDALSRLIKISPEIAEQHQLAVIDCLE
DPDDTLKRKTFELLYRMTKSSNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPS
NHWFIQTMNKVFEHAGDLVNIKVADNLMRLIAEGFGEDDDTADCQLRSSAVESYLRIIGE
PKLPSAFLQVICWVLGEYGTAGGKYSASYITGKLCDVAEAHSSNDTVKAYAVTALMKVYA
FEIAAGRKVDMLPECQSLIEELSASHSTDLQQRAYELQAVVTLDAHAVEIIMPSDASCED
IEVDKNLSFLDSYVERSLEQGAQPYIPENERSGMINISNFRSQDQHDTSTHTLRFEAYEL
PKTSAPPRISPVSLAPSTELVPVPEPSYPVEMHHVASVPSVSDTGSTELRLRLDGVQKKW
GRPTYSSPASSSSDSTSHKAVNGVTQSDVSSTSTSRTRDSSYDSRSAQAEISSEKKKLAA
SLFGGPSKTEKRPSSTSHKVARSTSPAVEKSQGPKAVASSTTGVVSEKAAPLQQPPDLLD
LGEPTVTSSASSVDPFKQLEGLLDPTQATSAANHGAVDNTKAADIMSMYSEFPPSGQSSV
IANPFTTNAGDANLIPGLSTTNKTGHAKGPNPRDALEKDALVRQMGVTPMSQNPNLFKDL
LG
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgggctcccagggtggcttcggcaattccaaggagtttttggatctcgtcaagtccatc
ggcgaggctcgatccaaggcggaagaggaccgcatcgtcctccacgagatcgaaaccctc
aagcgtcgaatcgtggagccggacatcccgaagcgcaagatgaaggagttcatcatccgc
ctggtgtacgtggagatgctgggtcacgatgcctccttcggctacattcatgcggtcaag
atgacccacgacgactcccttctcctcaagcggacggggtacttggcggtgactctattt
ttgaatgaggatcatgatttgattatactcattgtcaataccattcagaaggatctcaaa
tcggacaattatttagtggtttgcgccgcgctgaatgcggtttgcaagttgatcaatgag
gagactattcccgcggtgcttccgcaggtggtggagctacttgggcactcgaaggaagcg
gttcgaaagaaggccatcatggccctacatcggttttatcagcgctcaccgtcctcggtc
acgcatctcgtctccaatttcagaaagaagctttgtgataatgatcctggagtcatgggt
gcaacactttgccctctttttgaccttattgcagtagatgccaattcttacaaggatttg
gtcatcagctttgtgagcattcttaaacaagtagctgagcgtagattaccgaagacttat
gactatcatcagatgccagctccattcattcagatcaggttgttgaaaattctggcattg
ctgggcagtggtgatagacaagcaagcgaaaacatgtatactgttgtgggtgacatattc
aggaagtgtgattcgacgagtaacataggaaatgctgttctttatgagtgcatatgctgt
gtttcttctatatatccaaaccctaaattattagaagctgctgctgatgtaatttccaga
tttttgaagagtgatagtcataatctaaagtatatgggcattgatgcccttagtagactg
ataaagataagtccagaaattgctgaacaacaccaattggctgtcattgattgcttagag
gacccagatgatactctaaagcgaaaaacctttgagctactatatagaatgaccaagtct
tcaaatgtggaagtgattgttgatcgtatgattgattacatgataagcattaatgataat
cattacaaaactgaaatagcatctcgatgtgttgaactggcagagcaatttgcaccaagc
aaccattggtttatccagaccatgaataaagtctttgagcatgctggagatttggtcaat
attaaggtggctgataatttgatgcggttgattgcggaggggttcggagaggacgatgat
actgcagattgtcagcttagatcatctgctgtggaatcgtatttacgtatcattggagag
ccaaagcttccgtctgcatttcttcaggttatttgttgggttttgggtgagtatggaact
gcgggtggaaagtattctgcttcctatatcactggaaagttatgtgatgtggcagaggcc
cattcaagcaatgacactgttaaggcatatgctgttacagcgctgatgaaagtatatgca
tttgaaatagcagcaggaagaaaagtggatatgctaccagagtgtcaatccttgatcgaa
gaactatcagcatcccactcaacagatttacaacagcgtgcctatgaattgcaagcagtt
gtcaccctagatgctcatgctgttgagattataatgccatcagatgctagttgtgaagac
attgaggttgataaaaacctttcattccttgacagttatgttgaacggtcattagaacaa
ggggctcagccctatattcctgagaatgagcgttctggaatgataaatattagtaacttc
agaagccaagatcagcatgacacttctacacatacccttaggtttgaggcctatgagctc
ccaaagacttcagcaccaccaaggatatctcctgtttcactcgcaccctcaactgaactt
gttccagtacctgagccatcttatcctgtagaaatgcaccatgttgcatctgtgccatct
gtatcagatacagggtcaacggaactcaggctgcgacttgatggagttcaaaagaagtgg
ggcaggccaacttactcttctcctgcatcgtcttcctcggattctacttcccataaggca
gtaaatggggtcacacaatctgatgtgagtagcactagcacctcaagaacacgtgatagc
tcttatgattctaggagtgcacaagctgaaatttcttcagagaagaagaagcttgctgct
tcactatttgggggtccttcaaaaacagagaaaagaccgtcttctactagccacaaggtt
gcaaggtccactagtcctgctgtggagaagtcccaggggccaaaggcagtggcttcatct
actactggagttgtatcagagaaggcagctccacttcaacaacctcccgacttgcttgat
ctgggtgaaccaactgttactagtagtgcttcatctgtggatccatttaagcaattggaa
gggcttctcgacccaactcaagctacttcagctgcgaatcatggtgctgttgataatacc
aaagcagctgatattatgtcaatgtattcagagttccctccaagtgggcagagcagtgtt
attgcaaatccttttaccactaatgcaggtgatgctaatcttatacctggtttgtcaacc
acgaacaaaactgggcatgctaagggcccaaaccctagagatgccttagaaaaagacgca
ctggtgaggcaaatgggcgtgaccccaatgagccagaatcccaacttgttcaaggatttg
cttggctaa

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