Vitis vinifera (wine grape): 100249416
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Entry
100249416 CDS
T01084
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100249416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100249416
Spliceosome [BR:
vvi03041
]
Complex C
Other components
Step II factors
100249416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
Tudor_3
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
100249416
NCBI-ProteinID:
XP_002285201
UniProt:
F6H8I7
LinkDB
All DBs
Position
5:join(8265162..8265177,8268244..8268407,8268497..8268609,8269278..8269694,8269833..8269968,8270066..8270365,8271969..8272185,8278892..8278995,8279312..8279380,8279461..8279538)
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AA seq
537 aa
AA seq
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MATASVAFKSREDHRKQLELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKAWYDRGAKIFQADKYRKGACENCGAMTHNAKTCMERPRQKGAKW
TSMHIAPDEKIETFELDYDGKRDRWNGYDAATYARVIERYEARDEARRKYLKEQQLKKLE
EKNNKQNGEEEVSDEEEDDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLR
IREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYGGDNQYRVSGQALEFKQLN
IHAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSRMKDTIMDKYGNAAAEEELPRE
LLLGQSERQVEYDRAGRIIKGQETSLPKSKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQ
MIRNSYCTGAAGIEAAEAATDLMKTNIARKAATEEAPAPVEEKKLATWGTDVPDDLVLDQ
KLLVDALKKEDERKKEERDERKRKYNVKWDDEVTVEDMEAYRMKKIHHDDPMKDFLH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcttctgtggctttcaaatccagggaggaccaccgaaaacagctggaatta
gaggaagcccgtaaagctgggcttgcaccagctgagcttgatgaagatggcaaagaaatc
aaccctcatattcctcagtatatgtcctcagcgccatggtatcttaatgctgagagacct
agtctgaaacatcaaaggaaatggaaatcagatccaaattacacgaaagcttggtatgac
agaggtgcaaaaatatttcaggcggataagtatagaaagggtgcatgtgaaaattgtggg
gctatgacacataatgcaaagacatgcatggagagacctcgacagaagggagcaaaatgg
acaagcatgcacattgcgcctgacgaaaagattgagacctttgagctggattatgatggc
aaacgagatcgctggaatggatatgatgctgcaacttatgctcgggtcattgaaagatat
gaggcaagggatgaagctcgaaggaaatatttgaaagaacagcaactgaaaaagttagaa
gaaaaaaacaataagcagaatggggaggaagaggttagtgatgaagaggaggacgatgaa
gatgatctgaaagttgatgaagccaaggttgacgagagcaaacaaatggactttgcaaag
gttgagaaacgtgtccgaactactggaggtggaagcacaggaactgtgaggaatctgcgt
attcgggaggatactgcaaagtatctcttaaatcttgatgtcaactcagcccattatgat
cctaagacccgatcaatgcgtgaagatcctcttcctgatgctgacccaaatgagaagttc
tatggaggagataatcaatatagagtgagtgggcaagccttggagttcaagcaactcaat
attcatgcttgggaagcatttgacaaggggcaggatatccatatgcaagctgctccatcc
caagctgaattgctgttcaagaattataaggtcatcaaggaaaagttgaagtcccgaatg
aaagacactataatggataaatatggtaatgctgcagctgaagaagagctgcccagggag
cttcttttggggcaaagtgagcggcaggttgaatatgatcgtgctggcagaattataaaa
ggccaggagacatctcttccaaaaagcaagtatgaagaagatgtctacattaacaatcat
acatgtgtctggggctcatggtggaaggaccaccagtggggctataagtgctgtaagcaa
atgatacgaaacagctactgtacaggtgcggctggaattgaggctgctgaagctgcaaca
gacctcatgaaaactaatattgctcgtaaggcagccactgaagaggctcctgccccagtg
gaggagaaaaagcttgctacctggggaactgatgtgccggatgacttggttcttgaccag
aaattacttgtcgacgctcttaagaaggaggatgagagaaagaaagaagagcgggatgaa
aggaagcgaaaatataatgtcaaatgggatgatgaggttactgttgaggatatggaggca
tataggatgaagaagatacatcatgatgatcccatgaaagattttctgcactag
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integrated database retrieval system
