Vitis vinifera (wine grape): 100249428
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Entry
100249428 CDS
T01084
Name
(RefSeq) protein transport protein SEC23 G
KO
K14006
protein transport protein SEC23
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100249428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100249428
Membrane trafficking [BR:
vvi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100249428
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Zn_ribbon_10
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
100249428
NCBI-ProteinID:
XP_002284161
UniProt:
A0A438KL68
A0ABY9BWC3
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Position
5:join(6741598..6742320,6742888..6744546)
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AA seq
793 aa
AA seq
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MDFVELETIEGLRWTWNSWPPFKPDASALVIPLSIMCTPLMQSSELPLLQYDPLICSRCG
AVLNPYARVEYQSRIWVCPFCYQKNSFPRSYSGIGENNLPAELFPTYSTVEYQLGRKSSN
PTSNLNLNPNPNWGNGTMSSSSLSSFRSSSSLVSSFSSSSLSGADSRVLGPAFVFVVDAC
SAAEELRALKNELLHVLAQLPENTMVGLVTFDSMVCVHDLCFAECSRVVLFHGDRELSSD
QIQEFLGITRTKQQQLGKTPTAEKQTFLVPVSECEFSITTAIEEIHSSVQVLPGHRPLRS
TGAAISAAIGLLEGCLVNKGSRIMVFTSGPATVGPGIIVNSDLSNAIRTHRDLINGHAPY
YRKSSGFYKKLSQRLSDASIVLDLFACSLDQVGASELKVPVETSGGFMMLGESFESDQFR
KCLRHIFNRDEEGNLMMYFDSTIEIVTTKDVKLCGALGPCVSLRKKNSLVSENEIGEGGT
YMWKLGTLTNKTCIAFFFQVGDEQKVQPGSAFFIQFITRYLHGNMGMRKRVTTVARRWVG
KHSPEIAAGFDQEAAASVMARLAIHRAETCYARDVIRWLDNELIRFASKFGDYIQEDPSS
FRLSANFSLYPQFMYHLRRSQFIDIFNSSPDETAFFRLMLNREGVVGSVIMIQPTLFQYS
FDGPPVPVLLDVRSISPDVILLFDSYFYVVIHYGSKIAQWRKLGYDRDPNNENLRKLLEA
PELDAEQVVAERIPVPKLIKCDQHSSQARFLLAKLNPSVTQHSTHTDGMDFIFTDDFSLQ
VFIEHLQTLAVQG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtcgaattggagacgatcgaaggcctcaggtggacctggaactcatggcca
cctttcaaaccagatgcatcggctctagtaatcccactcagcataatgtgtacccccttg
atgcaatcgagcgagcttcctttgctgcaatacgaccctctcatctgcagtcggtgcggc
gccgtcttgaacccctacgcccgcgtggagtaccaatctcgcatctgggtctgccccttt
tgttaccagaagaactcgtttccgcgttcctatagtggcatcggagagaacaatcttcca
gcggagctgttccccacttacagcaccgtcgagtaccaactcggtcggaaaagctccaat
cccacctcgaatttgaatttgaatccgaatcccaattggggaaatgggacgatgtcttct
tcttcattatcgtccttcaggtcgtcttcatctttagtatcgtccttttcatcgtcctcg
ttgtcgggtgcggattctcgtgtgttggggccggcgtttgtgtttgtagtggacgcctgc
tcggctgcggaggagcttcgggcgcttaagaatgagttgttgcatgttcttgcgcagttg
ccggaaaatactatggtggggttggttacttttgactcgatggtgtgtgttcatgatctt
tgtttcgctgagtgctcgagggttgtgctgtttcatggtgaccgtgaactctcatcggat
cagatccaagaattcttgggtattactcgcacaaagcagcagcaacttggaaagacaccg
actgctgaaaagcaaacttttctggttccagtatctgaatgtgagttcagtatcacaaca
gcgattgaagagattcattcttcagtgcaggtcttgccaggccaccgccctcttaggtcc
acaggagcagcgatatcagctgccattggacttctagaaggatgcttggtgaacaaaggt
tcacggatcatggtctttacatccgggcctgcaacagttggccctgggattattgtaaac
tcagacctgagtaatgccatcagaactcaccgagacctcattaacggtcatgcaccttat
tatagaaagtctagcggcttctacaagaaattgtcgcagagattatcagatgcatctatt
gttcttgatttgtttgcttgttctcttgatcaagttggagcctcagagttgaaagtccct
gttgagacctcaggcggattcatgatgctaggggagtcatttgagtcagatcagttcaga
aaatgcctgcggcacatattcaatcgggatgaagaagggaatttgatgatgtattttgat
tcaactattgagatagtgaccacaaaagatgttaaactttgtggagctcttggaccttgt
gtgtcccttcggaaaaagaacagtttagtgagtgagaatgagattggtgagggtggtact
tatatgtggaagttgggcacactgactaataaaacatgcattgctttcttcttccaagtg
ggtgatgagcagaaagttcaacccggttctgcattcttcatacagttcataacacgttat
ctacatgggaacatgggaatgcggaaaagggttaccactgtggcaagaagatgggtgggg
aagcactcaccagaaatcgccgctgggtttgatcaagaagcagcagcttcagtcatggcc
agacttgccatccatcgagcagagacgtgttatgctcgagatgtcatcagatggctggat
aatgaactgatccgttttgcttccaagtttggggactacatacaagaagatccatcttcc
tttcgcctgtcagccaatttctctttgtacccacagttcatgtaccatttaaggaggtca
cagtttattgatatctttaatagcagtcctgatgaaactgctttcttccgactgatgctg
aaccgtgaaggggtggttggttctgttataatgatacaacccacccttttccaatactct
tttgatgggcctcctgttccagtcctcctggatgttcgctcaatctctccagacgttatt
ttgctatttgattcttacttctatgtcgtaattcattatgggtctaagattgctcagtgg
cggaagcttgggtatgacagggacccaaacaatgagaatctgcgaaagctgttggaagcc
ccagagcttgatgcagagcaagtagtagcagaacggattccagtgcccaaacttataaag
tgtgaccaacacagcagtcaagcaagatttcttcttgccaagttgaatccatctgttact
cagcattcaacacacacggatggtatggatttcatatttactgatgattttagcttgcaa
gtttttattgaacacttgcagaccttggcagtacaaggttga
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