KEGG   Vitis vinifera (wine grape): 100249491
Entry
100249491         CDS       T01084                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
  KO
K18998  RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vvi01009]
    100249491
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100249491
Enzymes [BR:vvi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     100249491
Protein phosphatases and associated proteins [BR:vvi01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   100249491
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     100249491
SSDB
Motif
Pfam: NIF dsrm
Other DBs
NCBI-GeneID: 100249491
NCBI-ProteinID: XP_010654171
LinkDB
Position
8:complement(join(17358809..17358914,17359082..17359158,17360356..17360516,17364207..17364303,17368968..17369021,17369109..17369239,17371466..17371523,17371642..17372009,17372113..17372254,17372504..17372593,17372687..17372792,17372928..17372998,17373096..17373253,17373593..17373803,17375799..17376269,17376354..17376623))
AA seq 856 aa
MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS
FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS
VPCGLYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRISGM
SAELKRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVVRPVIRFPERNIV
LTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEA
HLIGSKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVPP
FTPYYAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSAP
DVSNYLMSEDAGFVPNGNANVPIAEGMHGAEVERRLNQPDEKHIVDSAASPIANSYEFRS
ETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGAPIKRDFSSFESDADMKRRLLIMKHGQD
VRNQSLGDPPILSRLPQISTSSLHPQGVWLVEDDSNRGHLNNRASGLVQEADVLKPDKQR
GHQIPFGHNTPGSTPVSLLPHLPQLKNDEVSAANERQKKNLPPASQPSEVGVSQNQASTT
GREQTEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGV
GMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGS
SELLMEDGFPKESISEAGEMAHGTTSSSVVNQQVQKRANSPRLPQSIPSKRSKEELMRGS
QSLSSSWPQKNGHTIS
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgagtcgtttagggttcaaatccctggtgtatcacggggatttgtttttgggagagctg
gacgctattcccgtaaaggaccagagtttccaattcccaaataacgagattcgggtccac
cacatatccccaatcagcgaacgatgccctcctctttcaattcttcatacaatctcttca
ttttcagtccgatgcaagctcgaatcgtcttctccaattcaacagcctaatttgattaat
ctacatgcctcttgtttccacgaattaaagacggcggtggtgttgataggagatgaagag
cttcacttggtggcaatgccgagtaagcagaagaagtttccttgcttttggtgttattct
gtgccctgcggtctctacagttctagcttgtggatgttgaatttacgttgtcttgccata
gtttttgaccttgatgagactctaattgttgcaaacactatgaaatccttcgaggataga
attgatgctcttcgaggttggattgcgcgtgaaagcgatcaagttcgaatctcaggaatg
tctgctgagttgaagcggtatatcgatgatcgagcacttttgaagcagtatacggagaat
gatttggtaatggataatggaaagatattgaaagttcaatcagaggaggttgctccgctg
tctgatagccatgagcgagttgttcggcctgtgattagatttccagaaaggaatattgtc
ctcacccgcattaatcctgagattcgtgatactagcgtgcttgtgaggttacgacctgct
tgggaggacctaagaagttacttaattgcaaaaggccgcaaaaggtttgaagtttatgtt
tgtaccatggctgaaagagattatgctttagagatgtggaggcttcttgacccagaggca
catctaataggttccaagcaacttttggaccgtgttgtatgtgtaaaatcaggctcaagg
aaatctttgttaaatgtctttcaaaatgggagttgccatccaaaaatggcaatggtgatc
gatgaccgtttaaaggtttgggaagataaggatcagccgcgagtccatgtagtaccacca
ttcactccttattacgctcctcaggcagagacaacaaatcctgttccaatcctatgtgta
gcaagaaatgttgcgtgcaatgtcagggcgggttttttcaaagagtttgatgagaatata
ttacgacaaatctctgaactcttctatgaagatgaggtggtgaatctgccttctgcacct
gatgttagcaactacttaatgtctgaggatgctggatttgtaccaaatgggaatgcaaat
gtccccattgctgaaggaatgcatggtgctgaagttgaacgaagactaaaccaaccagat
gagaagcatattgtagattctgctgcctctcctatagcaaatagctatgagttcagatct
gaaacccttcagccgcctgcattaactgttcagaatgttgttggcccaacatcttcgaga
ctcctcatgccttctcagaaacctagcttgcttggggctcctatcaagcgagatttcagc
tcttttgaatctgatgctgacatgaagagaagactccttattatgaagcatggccaagat
gtacggaatcaaagcttgggtgatcctcctattctttctagattaccacagatatcgact
tcctcattgcatccgcagggggtttggttggtagaagatgacagtaatagaggacattta
aataaccgagcatcgggacttgttcaagaagctgatgtgttaaaacctgataagcagcgg
ggtcatcagattccatttggtcataatacaccaggttctactcctgtgagtttacttcca
catctgccccaattgaagaatgatgaggtatctgctgcaaacgaacggcaaaagaaaaat
cttccacctgcaagtcagccatcagaagttggtgtctctcagaatcaagcatctaccact
ggtagagaacaaactgaagctggaaaagtgaacatgatgccaccacatttatctattgga
gttctgcaagaaattggacggagatgcagctcaaaggttgagttcaggtctgttgtaagc
accagtaaagatttgcagttctctgttgaagtgttgtttaccggtgagaagataggtgtt
ggaatgggtaagacgaggaaggatgctcaacaacaagctgctgagaatgctcttcacagt
ttagctgataaatatgtagcatataccacaccacattctggagctgtggataaagatttt
gataagctttcactttcaaatgaaaatgggtttctgtgggatactactagtgctggatct
agtgaactgctaatggaagatgggtttcccaaagaaagcatttctgaggctggtgaaatg
gcgcatggtactacttcctccagtgtggtaaatcagcaagtgcagaagcgtgccaattcg
cccagattgccccaatctattccgagtaaaaggtccaaagaagaactaatgcgtggttca
caaagcctctcatcctcatggccacaaaagaatggacataccatttcatga

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