Vitis vinifera (wine grape): 100249543
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Entry
100249543 CDS
T01084
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100249543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100249543
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
100249543
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100249543
mRNA degradation factors
5'-3' decay
Decapping complex
100249543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
100249543
NCBI-ProteinID:
XP_010658405
UniProt:
D7TM92
LinkDB
All DBs
Position
13:complement(join(5695876..5696060,5696865..5696932,5697020..5697123,5698160..5698312,5699958..5700053,5701409..5701536,5704543..5704694,5705715..5705794))
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AA seq
321 aa
AA seq
DB search
MSSIHRSSSATLKNGNPPQELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNSV
EKNPSLKSFNLKEFTSLLFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETFER
CLLVKGWKGTSWSFPRGKKNKDEEDHTCAIREVQEETGFDVSKLLNQDEYIEEIFGQQRV
RLYIIAGVKDDTAFAPLTKKEISEISWHRLDDLQPVSGDVISRGLSGVKLYMVAPFLLSL
KSWISAHQPPIAPKFDAPAKGFCVWKAKNSSTGSSTMIAENQATKPVSDVHPPDTGPGRS
FRNFRFDTTAILKAMDSAFSA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcatccatcgatcttcaagcgctactctgaagaacggaaatcctcctcaagaa
ctcctcgacgatctctgtagtcgttttgtcttgaatgtgccgaaggaagaccaacaatca
tttgagaggattttatttcttgtggagtatgcacactggttctatgaggacaactcagta
gaaaaaaatccgtcgctgaagtccttcaatttaaaagaatttacctctttattatttaac
agctgtgatgttttacgaccttatgttgctcacatagatgatatttttaaggacttcact
tcctacaaggttcgagtacctgtaactggggcaatcattttggatgaaacctttgaacgg
tgcttactagtgaagggatggaaaggaacaagctggagttttccccgtggaaaaaagaac
aaagatgaagaagaccacacgtgtgccattagagaagtacaggaggaaacaggttttgat
gtctcaaaacttcttaaccaagatgagtacattgaagagatatttggacaacaaagggtg
cggctttacataatcgctggtgtgaaggatgatactgcctttgcgccacttaccaaaaaa
gagatcagtgaaatctcatggcatcgactcgatgaccttcagccagtaagtggtgatgtg
atatctcgtgggctctcaggtgtcaagctttacatggttgctcctttcttattatctttg
aaatcatggatttcagcacatcaaccccccatagccccaaaatttgatgcgcctgccaaa
ggattctgtgtgtggaaagccaagaacagctctacagggagtagcacaatgatagcggag
aaccaggcaacaaaacccgtatcagatgttcaccctcctgacacaggtcctggcaggagc
ttcagaaacttcaggtttgataccacggcaatcttaaaagcaatggattcagccttttct
gcttag
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