Vitis vinifera (wine grape): 100249600
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Entry
100249600 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100249600
KO
K19022
AP-5 complex subunit beta-1
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100249600
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
100249600
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
100249600
NCBI-ProteinID:
XP_010654554
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Position
1:complement(join(22315702..22317190,22317412..22317851,22330337..22331785))
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AA seq
1125 aa
AA seq
DB search
MTEKPPLKYLSPQDWELLIEDFQYDVVRREKWTSHYSPLSILDLALSSILRKDFPLKLSL
ISFLEEFSDSLFRNFEVQLALDRLIDAVRSVVQAPHDAVSFSSALKERMVVAVTSILICI
GNDVEVCLGQLESLVELLLTIVNRPSHGADRQMRAVACECLRELERAFPCLLAEIAGHIW
GLCQSERTHASQSYILLFTLVIHNIVTRKVNVSILNTSVPLVPFNVPQFVVGGSSREVSG
LNFKELRRVMAFLLESPQILTPSAMMEFMSLVMPVALVLELQASMLKVQFSGLLYSYDPM
LCHVVLMIYSRFVDAFDGQEASIARRLVLISREAQLPLVFRLLALHWLLGFIGLVPDSGG
RKKQSIVEIGLGFFYPSVFDPLALKSLKLDLLASCAICLNTLSADNMGGGSSEVAGPRVS
VVKLFEDGLVSVSAFKWLPPWSTETAVAFRTFHKFLIGARSHSDTDSSTNRTLMESTIFH
TLERLLVEMTLEFQRLVPVIVAFVDRLLLCHKHRWLGERLLQTFDQHLLPKATIDYRLAS
YFPIFDRIAENDTVPACGLLELLTKFIVSLVEKHGPDTGLKSWSLGSKVLGICRTLMIHH
HSSRLFLGLSRLLAFTCLYFPDLEVRDNARIYLRMLICIPGKKLRHILNLRAQLPGIAPS
PHTSSFFNVQSPRPSRDLKKSRNISSYIHLERVIPLLVKQSWSLSLPTLGIGGDKPGYLE
NIMDSEPPVDMEREVDGSSSIQIISETEKIDHPQEPLRVMDSKISEILGILRRHFSCIPD
FRHMPGLKIRISCSLRFKSEPFNRVWGADVPAADLDGVDALPAIYATVLTFSSSAPYGSI
PSFHIPFLLGEPPTNGYSSGQKGSLDIVPVENGSEEEESFRAPVMIELEPREPMPGLVDV
SIETNAENGQIISGQLQSITVGIEDMFLKALIPADIAEDGVPGYYSEVFHALWEACCTSS
NTGRETFPLKGGKGVTAINGTRSVKLLEVPAMSLIRAVERHLAPFVVSVMGEPLVNIVKD
GGAIRDIIWKDGASDSALDVSTSVTDYAEEPLQLKYIDEEDDRESNVNISNRNIGCFLVL
IFLPPRFHLLFQMEVCELSTLVRIRTDHWPCLAYIDDYLEALFLS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaagccgccattaaaatacctctcaccccaagattgggagctcctcattgaa
gacttccaatacgacgtcgtacgccgcgagaaatggacatcccactactccccactctcc
atcctcgacctcgccctctcctccattctccgcaaggacttccccctcaagctctctctc
atctccttcctcgaagagttctccgattctctcttccgcaatttcgaagtccaactcgcc
ctcgaccgcctcatcgatgccgtcagatcggtggttcaagctcctcatgatgctgtctcc
ttctcctccgcgctcaaggagcgaatggtggttgcggtcacctccattttgatatgcatt
ggaaatgatgtcgaagtttgcctaggccaactggagagcttggtggagttgcttttgaca
attgtgaatcggccgagtcatggggcggatcggcagatgagggcggtggcctgcgagtgc
ttgcgggagttggagagggcgttcccgtgcttgctggcagagatcgcggggcatatttgg
ggattgtgccagagcgagcgaactcacgcttcgcagagctacattctgttgttcacattg
gtgatacataatattgtgactaggaaggtgaatgtatcgattttaaatacatcggtgcct
ttggtgcccttcaatgtgccccaatttgtggttggaggttcgagcagggaggtttcgggg
ttgaattttaaggagctgaggagagtgatggcgtttttgttggaatcgccgcagattttg
actcctagcgcgatgatggagtttatgtcgttggtgatgccggtggcgttggtgttggag
ttgcaggcatcgatgttgaaggtgcagttctctggcctgctttactcctatgatcccatg
ctatgccatgttgttctgatgatttattcgcgtttcgtagatgcgtttgatgggcaagag
gccagcatcgctcgccggcttgtgttgatctcgagggaggcccagctccctcttgttttt
cgcttgcttgccctccattggttgttgggtttcattggattggtaccggatagcggcggg
aggaagaaacagtcaattgttgaaataggtttgggatttttttacccgtccgtctttgat
ccgcttgcactgaagtcattgaagcttgaccttcttgcctcctgtgccatatgtctcaac
acattgagtgcggataatatgggaggagggtcaagtgaggtggcagggccccgagtatct
gtggtgaagctatttgaggatggccttgtctctgtatccgcgttcaagtggttgcctcca
tggagcacagaaactgcagtggcattccgcacctttcacaaattcctgataggtgcccgg
tctcattctgatactgattcttccaccaatagaaccctgatggagtctaccatcttccac
actctagagaggctgcttgtggagatgacattggagtttcagagattggttccagtaatt
gttgcttttgttgaccgtttgttgctctgtcacaagcatcgttggttgggagaacgcttg
cttcagacatttgatcagcatttgcttccaaaagccaccatagactatagattggcttct
tatttcccaatttttgatagaattgctgagaatgataccgttcccgcttgtggattgttg
gagctgcttaccaaatttattgtttcccttgttgaaaaacatggcccagatacgggattg
aaatcttggtctctgggaagtaaagttcttggcatttgccggacgttgatgatacaccac
catagttctagattattccttggattatctcgtctccttgcattcacttgcctgtatttt
cctgatttagaggttcgggacaatgcaaggatctacctgcggatgctgatctgtatacca
ggaaagaagcttagacacatattgaacctcagggcacaactccctggaattgcgccatct
ccacataccagctcattcttcaatgttcagtctcctcggccttctcgtgatcttaagaaa
tccaggaatatctcttcttacattcaccttgagcgtgttataccactgcttgtaaaacaa
tcttggtccttgtctttgccaactttgggtattgggggtgacaaacctggttatctggag
aatatcatggacagtgaacccccagttgacatggaaagggaggttgatggcagtagtagt
atacaaatcatctctgagactgaaaaaattgatcatccacaggagcctttacgtgtgatg
gattcaaagatttcagagatcctaggaatattgaggcggcatttttcatgtattccggat
ttcagacacatgccagggcttaagattagaatatcctgtagtttgagatttaaatctgag
cccttcaatcgtgtatggggggctgatgtgcctgctgctgatttggatggtgtagatgca
cttcctgccatatatgcaactgtgctcacgttttcatcttcggcaccttatgggtctatc
ccatcatttcacataccctttttacttggtgaacctcccacaaatggttattcctcaggt
caaaagggctcattggatattgtccctgttgaaaatggttcagaagaggaagaaagtttc
agggctcctgtaatgattgaattggaaccacgggaaccaatgcctggtcttgttgatgtt
tccattgaaacaaatgcagaaaatggtcagatcataagtggacagcttcagagtatcaca
gtgggcattgaagacatgtttctcaaggcccttatcccagccgacattgcagaagatgga
gttcctggttattactcagaagtgttccatgctctgtgggaggcatgttgtacttcatcc
aacactgggagggagaccttccctttgaaaggaggcaaaggagtgacagcaatcaatggg
acccgatctgttaagctccttgaagttcctgcaatgtctttgatccgggcagttgagcgc
cacttggcaccctttgttgtaagtgtgatgggtgaaccccttgttaacattgtaaaggat
gggggagcgatcagagacatcatctggaaggatggagcctcagattcagccctagatgtt
tccacctcagttactgattacgcggaggagccactccaactcaagtacattgatgaagaa
gatgacagagagagcaatgtgaacatcagcaacagaaacattgggtgctttctggtcttg
atatttcttccaccaaggttccatctcctttttcaaatggaggtatgtgagctctcaact
ttagttcggattagaactgatcactggccatgcctagcttatattgatgattatttggaa
gctttgtttttatcatag
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