Vitis vinifera (wine grape): 100249740
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Entry
100249740 CDS
T01084
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
vvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100249740
03015 mRNA surveillance pathway
100249740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100249740
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100249740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
Motif
Other DBs
NCBI-GeneID:
100249740
NCBI-ProteinID:
XP_002276574
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All DBs
Position
12:complement(join(18836156..18836299,18837449..18837697,18845171..18845287,18845853..18846053))
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AA seq
236 aa
AA seq
DB search
MAMAGSDGREGEEELKQLAELSKSLKEGERLLAPTRRPDGTLRKPIRIRAGYVPQDEVAI
YQSKGALWRKEMASQEGPPGYDPPTDAKPKTKSVKRNERKKEKRLQAALDKGKNLEQMVD
GEVNQDGVLSAEDVNHGSEFVESVASQMNELTVTENPTTVTPPSESIECLNPGGAAPDID
KRIRALKKKIRLTEAQQQKASQQEMKPEQLDKMMKLEGWQKELKLLEDKKAELAAS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctggcagtgacggcagagaaggagaagaagagctgaaacagttggcggag
ctcagcaaatcgctaaaagaaggagagagacttctagctccgactcgaagacccgatggt
acgctccgaaaacctatccgaattagggctggctatgttcctcaagacgaagtcgccatt
tatcaatccaagggcgctttgtggaggaaggagatggcttcacaggaagggcctcccggt
tatgatccacctacggatgcaaaacctaagaccaagtctgttaagaggaatgaaagaaag
aaagagaagcgactacaggctgcacttgataagggtaagaacttggagcaaatggtagat
ggagaggttaaccaagatggagtgctttctgctgaagatgtgaatcatggatcagaattt
gtcgagtcagtggcatctcagatgaatgagctaacagttactgaaaatcctactacagtt
actcctccttcagagtcaatagagtgtctaaatccagggggagctgctcctgatattgat
aaaagaatccgagcattaaaaaagaagattcggctcacagaagcccaacagcagaaagcg
tcacagcaagaaatgaagccagagcaattggacaagatgatgaaactggaaggttggcaa
aaggagctaaagcttttggaggacaaaaaggcagaactggcagcatcatga
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