KEGG   Vitis vinifera (wine grape): 100249983
Entry
100249983         CDS       T01084                                 
Name
(RefSeq) structural maintenance of chromosomes protein 5
  KO
K22803  structural maintenance of chromosomes protein 5
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100249983
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     100249983
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_29 Vip3A_N ABC_tran AAA_27 AAA_13
Other DBs
NCBI-GeneID: 100249983
NCBI-ProteinID: XP_002272410
UniProt: A0ABY9D6A4
LinkDB
Position
13:complement(join(27070106..27070167,27070262..27070365,27071767..27071839,27071929..27072016,27072098..27072146,27074163..27074217,27074307..27074406,27074959..27075036,27075111..27075227,27086421..27086524,27092544..27092616,27093581..27093658,27093841..27093965,27094052..27094115,27094328..27094473,27094561..27094726,27095677..27095775,27095862..27095990,27101776..27101841,27101937..27102081,27102163..27102284,27110440..27110595,27110705..27110816,27117498..27117643,27117761..27117865,27117980..27118129,27118377..27118450,27123440..27123593,27123662..27123839,27124067..27124104))
AA seq 1051 aa
MAERRSKRPKITRGEDDYLPGNITEIELHNFMTFNDLKCKPGSRLNLVIGPNGSGKSSLV
CAIALGLGGDPQLLGRASSIGAYVKRGEESGYIKISLRGDTEEEQITIMRKIDTRNKSEW
LFNGKVVPKKDVIEIVRRFNIQVNNLTQFLPQDRVSEFAKLTPVQLLEETEKAVGDPQLP
VQHCALVLKSRELKKLEKAVEQNGEMLNCLKTLNSEREKDVERVRQRQELLAKVESMKKK
LPWLKYDMQKVRYMEAKEQENDAKKKLDEAAKTLNDIREPIEKQRQEKAALDAKCKKVSG
LMNGNSKRRMELLEKENRLGVQARGKYNEMEELRRQEESRQQRISKAKEDLVAAELELAS
LPPYEHPKDEIERLGSQILELEFSASQKRLVKSEKEKLLGQKKGALRQCVDRLKDMENKN
NKLLQALQNSGAEKIFEAYHWLQEHRHELNKDVYGPVLLEVNVSHRIHADYLEGHIPYYI
WKSFITQDPDDRDFLVKNLRLFDVPVLNYVRNEDRHKEPFQISEEMRKLGISSRLDQVFD
SPDAVKEVLTSQFALEHSYIGSRETDQKADEVSKLGILDFWTPENHYRWSVSRYGGHVSA
IVEPVARSRLLVCSTDTGEIERLRSKKKELEEIIDDLEENFKSLQIEQRLLEDEAAKLHK
QREEIINTVQLEKRKRREMENRVSQRKRKLESMEKEDDLDTVMAKLIDQAAKFNIQRYQC
VIEIKNLLIESVSYKRTFAEKHMTSIEFDAKIRELEVGIKQQERFAMQASLHFENCKKEV
EDHRQQLAAAKRHAESIAVITPVLEKAFLEMPATIEDLEAAIQDTISQANSILFLNHNIL
EEYEECQQKIEAISTKLEADEKELRMYLAEIDALKENWLTTLRNLVAQINETFSRNFQDM
AVAGEVSLDEHDIDFDQFGILIKVKFRQAGELQVLSAHHQSGGERSVATILYLVSLQDLT
NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNI
MNGPWIEQPSKVWSNGDCWGTVVGLLGKSQC
NT seq 3156 nt   +upstreamnt  +downstreamnt
atggcggagcgtcgctctaaacgccccaaaatcaccagaggggaagatgattatttacct
gggaatataactgagattgagctccataattttatgacattcaatgatctgaaatgcaaa
ccgggttcacgtttaaatcttgtaattggacccaacggatcagggaaaagctctctcgtg
tgtgccattgccctaggtcttggcggtgatcctcagctgcttggaagggcttctagtatt
ggtgcatatgtgaagcgtggggaggagtcgggatacatcaagatttccttgagaggggac
actgaagaggagcagattaccattatgcgcaaaatagatacacgtaacaagtctgagtgg
ttgttcaatggcaaagtggtgccaaaaaaagatgtaattgaaatcgttcgaaggttcaat
atccaagtcaacaatttgactcaattcttgccacaagacagggtctctgaatttgctaag
ttaactcctgtgcaacttctagaagaaacagaaaaggctgttggtgatcctcaactacca
gtccaacattgtgctcttgttcttaaaagtagagaactgaagaaacttgaaaaagctgtc
gagcagaatggggaaatgttgaattgtttgaagacacttaattctgaacgagaaaaagat
gttgagcgtgtccgtcaaagacaagaacttctagcaaaggttgaatccatgaaaaagaaa
ctgccatggttgaagtacgatatgcagaaggtccgatatatggaagctaaagagcaggag
aatgatgcaaaaaagaagttggatgaagctgctaagactttgaatgatatcagagaacct
atagagaaacagaggcaggagaaagcagcactagatgctaaatgcaaaaaagttagtggg
ctcatgaatggcaattctaagaggcgcatggaacttctagagaaggaaaatcgtttggga
gtgcaagcacgaggaaaatacaatgaaatggaagagttgaggaggcaagaagaatcacgt
caacaaagaatttcaaaagctaaggaagatcttgttgctgctgaactagaacttgctagc
ctgcctccctatgaacatcctaaagatgaaattgaaagattaggatctcaaattcttgag
ctagaattctctgcaagtcaaaaaaggctcgtaaagtcagaaaaggaaaaactcttaggt
cagaagaaaggagccctgaggcagtgtgtagataggttgaaggatatggaaaataaaaat
aataaactgttacaggcattgcaaaattccggagctgaaaagatatttgaagcttatcac
tggttgcaggaacatcgccatgagttgaataaggacgtgtatggtcctgtgttgcttgag
gttaatgtgtcacatcggattcatgcagactatttggaaggtcatatcccttattatatt
tggaagtccttcataactcaggatcctgatgaccgggatttcttagtaaaaaacttgagg
ttatttgatgttcctgtcttaaattatgtgcggaatgaagatcgtcataaagaacccttt
caaatatctgaggagatgcgcaaacttggcatctcctcccggcttgaccaagtgtttgat
tctcctgatgctgtcaaggaggttttgactagccaatttgctctggaacattcgtatatt
ggatccagggaaactgatcagaaggctgatgaggtttcgaaattaggaattttggatttt
tggactccagaaaatcactacagatggtctgtttctagatatggtggtcatgtttcagca
attgttgaaccggtggctcgctcacgtcttcttgtctgtagtacggatactggggaaatt
gaaaggctgaggtccaagaaaaaggagcttgaagagatcattgatgatttagaggaaaat
ttcaaatcacttcagatagaacaaagacttttagaggatgaagcagctaaacttcataag
cagcgggaggagattatcaatactgtacaacttgagaagagaaagcgtcgtgaaatggaa
aaccgagttagtcaaagaaaacggaaattagagtctatggagaaggaggatgacttggat
acagttatggcaaagctcattgaccaagctgcaaaatttaacattcaacggtaccaatgt
gtaattgaaattaagaatttactcattgagtcagtttcctacaaacgaactttcgctgaa
aagcatatgacctccattgaatttgatgcaaagattagagaattggaagttggtatcaag
cagcaagaaaggtttgctatgcaagcatccttgcactttgagaattgtaagaaggaagtg
gaggatcatcgacagcaactggcagctgccaagaggcatgcagaatcaattgccgtgatc
actccagtacttgagaaagcattccttgagatgccagctacaatagaagatttggaggct
gctattcaagatactatctctcaagccaattctattctttttctaaaccacaacattttg
gaagaatatgaagagtgtcaacaaaagatagaagccatttctacaaaactggaagcagat
gaaaaggaactgaggatgtatttggcagaaatagatgccctgaaggaaaattggcttacc
acattgagaaaccttgttgctcaaataaatgagacctttagtcgaaacttccaagatatg
gctgttgctggagaagtttcattggatgagcatgatatcgattttgatcaatttgggata
cttataaaagtcaagttcaggcaagcaggagaacttcaagttcttagcgcccaccatcaa
tctggaggggagcgctcagttgcaactattctgtatcttgtttctctacaagatctcaca
aactgcccttttagggtggttgatgagataaatcaaggaatggacccaataaatgaaaga
aagatgttccagcaactagtgagagctgcaagccaacctaatacaccacaatgtttctta
cttacaccaaagttgctaccggatctagaatacagtgaggcttgtagcattctgaatata
atgaatgggccatggattgagcagccttcaaaagtgtggagcaatggagattgctgggga
actgtcgttggtttattaggaaaaagccaatgctaa

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