Vitis vinifera (wine grape): 100250096
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Entry
100250096 CDS
T01084
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00730
Thiamine metabolism
vvi01100
Metabolic pathways
vvi01240
Biosynthesis of cofactors
Module
vvi_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
100250096
Enzymes [BR:
vvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
100250096
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
100250096
NCBI-ProteinID:
XP_002280227
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Position
6:join(6961046..6961347,6961551..6961678,6962207..6963033,6963366..6964031)
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AA seq
640 aa
AA seq
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MASVHTTLTSLLCKNGNHSAPAKFPGTAFLPGFDGVGRVSKKGLCLTFMSSGPRATLTSD
PPKTNSEKTKQRKGTVDPSAPDFEPHPTFEQCFPRSSKEYREVIHEPSGHVLKVPFRRIH
LSGDEPNFDTYDTSGPQDISPRAGLPKLRKEWIDRREKLGGPRYTQMYYAKQGIITEEML
FCAAREKLEPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIE
EEVYKVQWATTWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAEDL
TWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTANRMTGIVSRGGSIHAKWCLAYHKEN
FAYEHWDEILDICNQYDISLSIGDGLRPGSIYDANDPAQFAELLTQGELTRRAWEKDVQV
MNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGT
ALLCYVTPKEHLGLPNRDDVKTGVIAYKIAAHAADLAKGHPHAQAWDDALSKARFEFRWM
DQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAE
EAVQQGMDAMSAEFLAAKKTVSGEQYGEIGGEIYLPTSRK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtgcatactaccttgacatcacttttgtgcaagaatggaaaccattctgct
cctgcaaagtttccaggcactgccttcttgcctgggtttgatggggttgggcgtgtttca
aagaaaggactatgcctcactttcatgagctctggccctagggctactttaacatctgat
cccccaaaaacaaattcagagaaaaccaaacaaaggaagggcacagttgatccttcggct
cctgattttgagcctcatccaacctttgagcaatgttttccaaggagctccaaagaatac
agggaggttattcatgaaccatctggacatgtacttaaagttccctttcgacgaattcat
ttgagtggggatgaacctaactttgacacctatgacacaagtggtcctcaagacattagt
ccacgtgctggactccctaaattgcgaaaagaatggattgacaggcgagagaaattgggt
ggaccacgatacacacagatgtactatgctaagcaaggaattataaccgaggaaatgttg
ttctgtgctgcccgtgagaagcttgagccagagtttgtgagatctgaggttgcccgtggg
cgggcaatcatcccgtccaacaaaaagcacttggagttggagcctatgatagttggaaga
aatttcttggtcaaagttaatgcaaatattggaaactctgctgttgctagctccattgag
gaagaagtttacaaggttcaatgggccacaacatggggtgccgacactgttatggatctt
tctactggacgccacatccatgagacccgtgagtggatcctacgtaactctgctgtacca
gtggggacagttcccatctatcaagcacttgaaaaagtgaatggaattgctgaagatctt
acctgggaagtattcagagacaccctgattgaacaagctgagcagggggttgattacttc
acaatacatgctggagttctgcttcgttatattccattaacagcaaatcgcatgactgga
attgtctctcgtggaggatcaattcatgcaaaatggtgcttagcttatcataaggagaac
tttgcatatgagcactgggatgaaatacttgacatctgtaatcaatatgacatctcgttg
tcaataggtgatgggctcagacccgggtcaatttatgatgccaacgatcctgctcagttt
gcagagcttttaactcaaggagaactaactcgcagagcatgggaaaaggatgtacaggtg
atgaatgaagggcctggacatattccaatgcataaaatcccagaaaacatgcaaaaacag
ctggagtggtgtaacgaagcacctttctacactcttggccctttaacaactgatattgct
ccaggatatgatcatatcacctctgccattggtgctgccaacataggggctcttggtact
gcgcttctctgttatgtaacaccaaaagaacaccttgggttgccaaaccgggatgatgtc
aagactggggtcatagcttataagatagctgctcatgcagctgatttagccaaaggtcac
ccccatgctcaagcctgggatgatgctctaagcaaagcaagatttgagttccgatggatg
gaccagtttgctttgtcattggaccccatgacagctatgtccttccatgatgaaaccctg
ccatcagaaggtgccaaagtggcacatttttgctctatgtgtggacctaagttctgttca
atgaagataacagaggatgtgcgcaaatatgctgaggagcatggctatggaagtgctgag
gaagctgtgcagcaaggaatggatgctatgagtgctgaatttcttgctgccaagaaaact
gtcagtggggaacaatatggtgaaattggtggagaaatctacttgccaacaagtcgcaaa
tag
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