Vitis vinifera (wine grape): 100250139
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Entry
100250139 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100250139
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100250139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100250139
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100250139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
100250139
NCBI-ProteinID:
XP_002276725
UniProt:
F6GUC5
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All DBs
Position
6:complement(join(8620461..8621151,8621258..8621391,8621899..8622037,8622388..8622518))
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AA seq
364 aa
AA seq
DB search
MTKRKGRSEISEETLNSEEKGDDFFACYLLASLSPRHKGHSYIGFTVNPRRRIRQHNGEI
TCGAWKTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANK
IKLAYTMFTLPAWQSLNLTVNFFSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSGSDQS
FFDNARGDEKEELGERGSSSDGFDQVIAHEETALEQFGWIEEHGLRQPGDSPSPEVVHCS
GKTQENAMRQPADLSTSKDEHRSPFCLIDSPVRTSSHSTEGTLDKDTSGLSKENKVLTMK
QLPATVAADRGKPKISSLDTSCEIEVIDLLSCSPDYRTNPCFKKRRATTVHPEIIDLTNS
PIFV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagaaaggggcgatcagaaatctcagaagaaaccctaaattcagaggagaaa
ggcgatgatttctttgcctgctatctactggcttccctcagccccaggcacaaaggccac
tcctatatcggatttacagttaatccaaggcgtagaatcaggcaacacaacggtgaaata
acgtgtggagcatggaaaaccaagaggaagcgcccttgggaaatggttctatgtatttat
ggtttcccaacaaatgtttctgctcttcagtttgaatgggcgtggcagcacccaacagag
tcactagccgtcagaaaggcagctgcaggtttcaaatccctttctgggattgccaataag
atcaaactcgcgtacaccatgttcaccctcccagcatggcagagcttgaacctcacagtg
aactttttctcaacaaagtatacaaagcattctgctggttgcccaatcttgccagagcac
atgagggtgcaagtttctcccatggatgagcttccatgctattcaggaagtgatcagagt
ttctttgacaatgccaggggcgatgagaaagaagaacttggtgaaagaggcagcagcagt
gatggatttgatcaagtaatagcccatgaggagactgctctggagcagtttggatggatt
gaagaacatggcttgagacaaccaggggactcaccctctccagaagtagttcattgttct
ggaaagacccaagaaaacgccatgagacaacctgcagacttgtccacttcaaaagatgaa
catagatcgccattttgtctcattgattccccagtgagaacatcttctcatagcacagaa
ggaactcttgataaagatacctctggattgagcaaagaaaataaagttctgacaatgaaa
caattgccagctacagtagccgctgatagaggtaaaccaaaaatcagcagtctcgatacc
tcttgtgaaattgaggttatagatctattgagctgctcacctgactacagaactaaccca
tgtttcaagaagagaagagctactactgtccatcctgagatcattgacttgaccaattca
cccatttttgtgtag
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