Vitis vinifera (wine grape): 100250148
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Entry
100250148 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100250148
04121 Ubiquitin system [BR:
vvi04121
]
100250148
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100250148
Membrane trafficking [BR:
vvi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100250148
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100250148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING_10
DUF6986
Motif
Other DBs
NCBI-GeneID:
100250148
NCBI-ProteinID:
XP_002285766
UniProt:
F6GUP5
A0A438EM87
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All DBs
Position
6:317642..318748
Genome browser
AA seq
368 aa
AA seq
DB search
MEDAMGGRYWCHSCSQVVNPIAEAEPKCPLCQDGFIEDIDGTASRDHNDSDSDLASDRTL
SLWAPILLGMMGNPRRRRRFRREDIEDEEEDNEDGEGRRGGETELDRELDSIIRRRRRSS
ATILQLLQGIRAGMVSESENSENDRDRDRDRERERERERLILINPFNQTIIVQGSFDSNQ
AQNQNQNTIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQC
SVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPNVS
SNSSERSNNGHGSSEEGDGDGRSGNGRRSTFRWPFTSLFSSQGSQTSNGNSSSSGANAPG
SASRANEN
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcaatgggaggaagatactggtgccatagttgctcacaagtggtgaatccc
atcgctgaagcagagcccaagtgccccttgtgtcaagatggattcattgaggacatcgat
ggcactgcttcaagggatcataatgactccgactctgatctagcttccgatcgaaccctc
tctctttgggccccaatcttgttgggcatgatgggtaatcctcgtcggcgccgcagattc
agaagagaagatatagaagatgaggaggaggacaatgaagatggtgagggtcgtagagga
ggagagactgaacttgatcgggaacttgattccataatcaggaggagaaggagaagttct
gctactattctccaactacttcaaggcattagagctggaatggtctctgaatcagagaat
tctgaaaatgatagggatagggatagggatagagaaagagaaagggaaagagagcgcctg
attctaataaatcctttcaatcaaactataattgttcagggttcttttgattcaaaccag
gcccaaaatcagaatcaaaacaccattggctccctgggggactatttcattggccccagt
ttagatttgttgctgcaacatttagcagaaaatgatcctaatagatatgggacaccaccg
gcgcaaaaagatgcaattgaagcaatgcccactgtgaaaattaaggagaatttgcagtgt
tcagtgtgtttggatgactttgagattggcgctgaggcaagggagatgccatgtaagcat
aaattccacagtgggtgtattctgccatggctggagcttcatagctcttgtccagtctgc
aggtttcagatagcagctgatgaatccaagcttgattcagatgcttctccgaatgttagc
agtaacagtagcgagaggagtaacaatggccatggtagcagtgaagagggagatggggat
gggagaagtggaaatggcagaaggtctacgttcaggtggccttttaccagtttattttct
tcccaaggatcacaaactagcaatgggaattcctcatcatcaggagcaaatgcaccaggg
agtgcatctagggcgaatgagaattga
DBGET
integrated database retrieval system
