Vitis vinifera (wine grape): 100250222
Help
Entry
100250222 CDS
T01084
Name
(RefSeq) chromatin modification-related protein eaf-1
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-RING_10
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100250222
NCBI-ProteinID:
XP_002279976
UniProt:
D7SK46
LinkDB
All DBs
Position
6:complement(join(6630104..6630191,6630347..6630534,6630747..6635057,6635147..6635362,6635580..6635786))
Genome browser
AA seq
1669 aa
AA seq
DB search
MGFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLAYVVSTTRACPYDG
YLVTEADSKPLIESNKALAETIGKIAVHCLYHRSGCQWQGPLSECISHCSGCAFGNSPVV
CNRCGVQIVHRQVQEHAQNCPGVQDAAAQGAAAAADQSQTAAQAGALASQTQPAQITPAS
APVQDLNQQVNSTAQAAAPTPEQWYQQQQQQYQQYYQQYPGYDPYQQHYQQYYPYQQQAV
QYQHPHMQPHPAQLSGQPQPQPQPQAQLQPLVQPQPQTQPQLQPQPQPQTQPQLQPQPQQ
QPQMQPQQQPQPQLQSQPPAQAQLQPQPQPLLQAQTQAQTQTQPQPHSLVQAPVAVQHQN
QVANQQAQNHPVAQQHSQIQSQTHPPHHGHQHPQTLQYPQAQSHPQPHSVQPRPQQHLQL
PQYQQPHPPMQHPQSQIQRQPNSQLLPQHHHLPQPQTQPLSQTQQPTLQPHPQPHPHPHA
LSQHHPSQPNQTPNPNPQSQTQPPSAHAVTGHHSFPQPRPQQQMPLGGMQQQPMHMHPQA
QFPQQSPQMRPSQAHAQSQQQSALLPLPGQAQNVLPPQQLPVHPHQQAGHPVHQRAAMQP
IQQSLPHQFVQQPPLGTGQNQLHQQGSFMQPPTPTMQSQLRPQAPPQSWQQHSHAYPQPQ
QKVAMLHGMQPQLPQNVGRPGMPNQGVQPQPFPQSQAGLSGAVQLRPMHLGPNQPSANQT
LGQHLEQSAHPQPGLNVKQTTFEKPDDDLSKKGVGGQEGESFSEKTAREDANGVAATSGI
ESNTVEIKSETDMKSMDEKQKTTGEDEDTISRINNSAKEIPESMRALGSDPMQQASEDGE
PVIKQMVKEEVIKSTVERSPGGKSIGIVVEDQKDELSVPPKQVEQVEHSLLQDKEIQNGL
LMKNPPIQQVEILDEMGGKLQKDSGDASGVMQLFTATNRGTEAVPPAPIPDSSAQNATPR
GSVSVSERKMLNQPGNQERNLLQAPTMPQGPSNDEYRGFPPPSQVQGRGFVPLPHPVPIL
DGGRHQPPPMQYGPTVQQRPAAPSSGQAMPPPGLVHNAPVPGQPSTQLQPQALGLLPHPA
QQSRGSFHHEIPPGGILGPGSAASFGRGLSHFAPPQRSFEPPSVVSQGHYNQGHGLPSHA
GPSRISQGELIGRPPLGPLPAGSFDSHGGMMVRAPPHGPDGQQRPVNPVESEIFSNPRPN
YFDGRQSDSHIPGSSERGPFGQPSGVQSNMMRMNGGLGIESSLPVGLQDERFKSLPEPGR
RSSDHGKFAEDLKQFSRSSHLDSDLVPKFGNYFSSSRPLDRGSQGFVMDAAQGLLDKAPL
GFNYDSGFKSSAGTGTSRFFPPPHPGGDGERSRAVGFHEDNVGRSDMARTHPNFLGSVPE
YGRHHMDGLNPRSPTREFSGIPHRGFGGLSGVPGRQSDLDDIDGRESRRFGEGSKTFNLP
SDESRFPVLPSHLRRGELEGPGELVMADPIASRPAPHHLRGGDLIGQDILPSHLQRGEHF
GSRNIPGQLRFGEPVFDAFLGHPRMGELSGPGNFPSRLSAGESFGGSNKSGHPRIGEPGF
RSTYSLHGYPNDHGFRPPGDMESFDNSRKRKPLSMAWCRICNIDCETVDGLDMHSQTREH
QQMAMDIVLSIKQQNAKKQKLTSKDHSTPEDSSKSKKGVLRGGGISIKP
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgataacgagtgcatactaaacattcaatctctcgctggagaatacttctgt
ccagtatgtcgattgcttgtctatccaaatgaagcattacagtcacagtgcactcattta
tactgcaaaccttgtttggcgtacgttgtgagcaccacccgggcctgtccttacgatggc
tatttggtgacagaggcggattctaagccactaatagaatcaaataaagcgctagcggaa
accataggcaaaatagcggttcattgtctctatcacaggagtggatgccaatggcagggt
cctctatctgaatgcatttctcattgttctgggtgtgcctttggcaattcgccagttgtg
tgcaacaggtgtggagttcaaattgtgcatcgtcaagtgcaagaacatgctcaaaactgc
cctggtgtgcaggatgctgcagcacaaggggcagctgctgctgctgatcagagccagact
gctgcacaggctggagctctagcttctcagacacaacctgctcaaattacacctgcttct
gcgcctgtgcaggatctaaatcagcaggtcaattctactgctcaggctgctgcaccgact
cctgaacagtggtatcaacaacaacaacaacaatatcagcaatactaccagcagtatcct
ggatatgacccttatcagcagcattatcagcagtattacccttatcagcaacaggctgtt
cagtatcagcatcctcatatgcagcctcatcctgcacaattatctgggcagccccaaccc
caaccccaaccccaggcccaactacagccacttgttcagccacaaccccaaacccaaccc
cagcttcagccacagccacagccccaaacccaaccccaacttcagccccagccccaacaa
cagccccagatgcagccgcagcaacagccccagccacaactccaatcccagcccccggcg
caggctcagctccaaccgcaacctcaacctctacttcaggcacagacacaggcacaaaca
cagacacaaccacaaccccattcacttgttcaggcgccagtggctgttcaacatcaaaac
caagtagctaaccaacaggcacaaaatcaccctgtagcgcagcaacattctcaaattcaa
tcacagactcatccaccacaccatggacaccaacatcctcagactctgcagtatccccaa
gctcaatcacatccacagccccattctgtccagcctcgtccacaacaacatctgcaattg
ccacaatatcagcagcctcatcctccaatgcaacatccgcagtcccaaattcagcgccag
cccaactctcagcttcttccccagcatcatcacctgccccagccccagacccagcctctt
tcacaaacccagcagcccacacttcaaccccacccccagcctcatccccatccccatgcc
ctttcccaacatcacccttctcaacccaaccagactccaaatcctaatcctcagtctcag
acacagcctccatcagcccatgcagtaacgggccatcactcctttccacaaccccggccc
cagcagcaaatgcctttggggggcatgcagcagcagcctatgcatatgcatcctcaggct
caattcccccagcaatctcctcagatgcgcccttcccaggctcatgctcaaagtcagcag
cagtcggctttgttgcctttaccaggtcaagcccaaaatgtcctccctccacagcagcta
ccggtccatcctcatcagcaagcaggtcatccagtccaccagcgtgctgccatgcagcca
attcagcagtcattgcctcaccagtttgtccagcagccaccattaggcactggtcagaat
caattacatcagcaagggtctttcatgcaaccaccaacaccaacaatgcagtctcagttg
cgcccccaggccccacctcaatcatggcagcaacattctcatgcctatccacagccccaa
cagaaggttgcaatgttgcatggcatgcaacctcagctgcctcagaatgttggaaggcct
gggatgccaaatcaaggggtacaaccacagccatttccacaatctcaagctggactttct
ggtgccgttcagcttaggccgatgcatcttgggcctaaccagccatctgcaaatcagaca
ctgggccaacacttggaacagtctgctcatccacaacctgggttgaatgtaaaacaaact
acgtttgagaagccagatgatgatttgtccaagaaaggtgtaggtgggcaagaaggtgaa
tcattctctgagaaaaccgctagagaggatgcgaatggtgtggctgcaacatctggtata
gaatctaatacagttgaaataaaatctgagacagatatgaaatccatggatgagaaacag
aaaactactggtgaagatgaggatacaatcagtaggattaataattctgccaaggagatt
ccggagtctatgcgagcattaggttcagatcctatgcaacaagcatcggaagatggagag
cctgttatcaagcagatggtgaaggaagaggttatcaagagtacagtagagcgttcacct
ggtggcaaatcaattggtattgtagttgaggaccagaaagatgaactcagtgtccctcct
aaacaagtggagcaagtggagcattctttgctgcaagacaaggaaattcagaatggcctc
ctgatgaaaaacccccctatacaacaagtggagattcttgatgaaatgggtggaaagttg
cagaaggattcaggggatgccagtggggtcatgcagcttttcactgccaccaataggggc
acagaagctgttcctccagctccaattcctgatagctctgctcaaaatgctacacctaga
ggttctgtttcagtgagtgagagaaaaatgttaaatcaacctggtaatcaggaaaggaat
ttgcttcaagccccaactatgcctcaaggtcccagtaatgatgaatacagaggctttcct
ccacctagtcaggtgcaaggcaggggctttgtgccccttcctcatccagtgccaattttg
gatgggggaaggcatcagccaccaccaatgcaatatggtcccactgtccagcaaaggcct
gcagcgccttctagcggacaagcaatgccgcctcctggtcttgtacataatgcaccagtg
ccaggtcaaccttccacccaattgcagcctcaggccctgggactcttaccacatccagca
caacagtcacgtggttcttttcatcatgaaatccctccaggtggtatcctaggtccaggt
tctgcagcatcctttggtaggggactgagtcattttgctcctcctcaaagaagctttgaa
ccgccatctgttgtttctcaagggcattataatcaaggtcatggtctcccttcccatgct
gggccctcaagaatctctcaaggtgaacttattggaagacctccactgggcccactgcca
gctggttcattcgattcacatggtggaatgatggtaagagcacctccgcatggtcctgat
ggtcagcagcggcctgttaatccagtggaatctgaaatattttcaaatccaaggcccaac
tactttgatggcagacaatctgattcacatattcctgggtcttcagaacggggtccattt
gggcagccctctggtgtccaatcgaatatgatgagaatgaatggtgggctgggcattgaa
tcttccttaccagttggattgcaggatgaaaggttcaaatctctacctgaacctggtcga
cgaagttccgatcatggaaagtttgcagaagatctcaagcaattctctaggtcttctcat
ttggattctgatcttgttccaaaatttgggaattacttttcatcttcaaggccacttgac
aggggttctcaaggatttgttatggatgctgcccaggggcttcttgacaaggcacctctt
ggattcaattatgattctggctttaaatccagtgctggcactggcacttcaaggttcttt
cctcctcctcatccaggtggtgatggagagagatcccgagcagttggttttcatgaagat
aatgttggaagatcagatatggctcgtactcatccaaattttcttggatctgttcctgaa
tatggtcggcatcatatggatggtttaaatccacgaagcccaaccagagagttctctggc
attccccatcgtggatttggtggcctttctggtgttcctggcagacagtcagacctagat
gatatagatggccgtgaatcacgtcgatttggcgaaggatccaaaaccttcaacctaccc
tctgatgaaagtaggtttccagttttgcccagccacttgcgtagaggtgagcttgaaggt
cctggggaattggtgatggctgatcctatagcatctagaccagctccccaccatttgagg
ggtggtgatttaattggtcaagatattcttcctagccatttgcagaggggtgaacatttt
ggttctcggaatatccctggtcagttgcggtttggagagccagtttttgatgcctttctt
ggtcatccacggatgggggaactgtctgggcctggaaacttcccttcgcgcctatcagct
ggtgaatcatttggaggaagcaacaagtcaggccatccacgaattggtgagcctggattt
aggagtacctattctctccatggatatccaaatgatcatggattcaggcctcctggtgac
atggagtcttttgataactcaagaaagaggaagccactaagtatggcatggtgccgcatt
tgtaacattgactgtgaaacagtggatggtttggatatgcattcacagacaagggagcac
caacagatggctatggatattgtcttaagcatcaagcagcagaatgcaaaaaaacagaaa
ttgacttccaaggatcactcaacccctgaagattcaagcaaatcaaagaagggtgtcttg
aggggcggaggaataagcattaagccatag
DBGET
integrated database retrieval system
