Vitis vinifera (wine grape): 100250245
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Entry
100250245 CDS
T01084
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100250245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100250245
03036 Chromosome and associated proteins [BR:
vvi03036
]
100250245
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100250245
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100250245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR75_1st
Vitelline_membr
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
100250245
NCBI-ProteinID:
XP_002271645
UniProt:
D7STD2
LinkDB
All DBs
Position
12:join(15631719..15631778,15631876..15631962,15632314..15632391,15632498..15632691,15634379..15634520,15636014..15636094,15651214..15651342,15653739..15653816,15655252..15655323,15655790..15655870,15655989..15656039)
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AA seq
350 aa
AA seq
DB search
MSNFSSITTASNPNPNKSIEVAQPPSDSVSSLSFSPKANILVATSWDNQVRCWEIMRNGP
TVGSVPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKE
VAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIV
FNLQNPQTEFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKC
HREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSTFNND
GSIFAYSVCYDWSKGAENHNPATAKSYIFLHLPQEAEVKGKPRIGTSGRK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttctcttcaatcactactgcttccaatccaaatcccaataagtcgattgag
gtggctcaacctccgagtgattctgtttcaagccttagtttcagtcccaaggcaaatatt
ctggtggccacttcatgggataatcaggttcgatgttgggagataatgcggaatgggcca
actgttggcagtgtgcccaaggcatcaatatcacatgaccagccggttctatgctctgct
tggaaggatgatggaacaactgtcttctctggaggctgtgacaagcaagtgaaaatgtgg
cctttgttgtctggcgggcaacctatgactgtggccatgcatgatgctcccattaaagag
gttgcttggatcccagagatgaacctcttagccacaggaagctgggacaagactcttaag
tattgggatacaaggcagcctaatcctgtgcatacccagcaactccctgaccgttgttat
gcactaactgtgagacatcccttgatggttgttggcactgcagatagaaatcttatagtt
tttaacttgcaaaaccctcagactgagtttaagagaatcacttcaccattgaagtatcag
acaagatgtgttgctgcctttccggatcagcaaggattcttggttggctcgatagaggga
agggttggcgtacatcatcttgatgatgcacaacaaagtaaaaactttacttttaaatgc
cacagggaaggcaatgagatatactcagtgaactctctaaacttccatcctgtgcatcac
acatttgccactgcaggctctgacggtgcttttaatttctgggacaaggatagtaaacag
agactcaaggctatgtcaaggtgcagtcaacctataccttgcagtactttcaacaatgat
ggatcgatatttgcatattcggtgtgttatgactggagtaagggtgcagaaaatcataat
ccagcaacagcaaagagctacatcttcctgcatttaccacaggaagctgaggttaaaggc
aaaccaagaattggaacaagtggtagaaagtga
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integrated database retrieval system
