Vitis vinifera (wine grape): 100250468
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Entry
100250468 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100250468 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03030
DNA replication
vvi03410
Base excision repair
vvi03420
Nucleotide excision repair
vvi03430
Mismatch repair
vvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100250468
03410 Base excision repair
100250468
03420 Nucleotide excision repair
100250468
03430 Mismatch repair
100250468
03440 Homologous recombination
100250468
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvi01009
]
100250468
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvi03032
]
100250468
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100250468
Protein phosphatases and associated proteins [BR:
vvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100250468
DNA replication proteins [BR:
vvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
100250468
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
100250468
MMR (mismatch excision repair)
DNA polymerase delta complex
100250468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
100250468
NCBI-ProteinID:
XP_002283370
UniProt:
A0ABY9DZ33
LinkDB
All DBs
Position
19:join(1058485..1058553,1062448..1062503,1062590..1062714,1066356..1066515,1067418..1067827,1068030..1068545,1069088..1069187,1069332..1069470)
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AA seq
524 aa
AA seq
DB search
MADIETLGILEEIEALVSDKLQVVSYKWLSRSFLVTSNVAKRLLHEFVEKHGGGLEVVYT
LSGWLKNDPPVYHIRLVSEPKLAEAKQEFDGHCSVQVYSVQACIPKDPAALWNAEFVQAE
ELFKQPFAVDNCLRDNRFCGISNSFVKRIAEGAPVSNVASQPKTTGLLGPSKSISAPQTI
AVQQPQERKVQQSSPKVSLQSPSVVTDVKDESNGTRAHDQASKPPADKGKAPPLPANKKK
GQNDKSSGTEGSLANMWGRASVKSKPSCAPVDVVSAEAQICAREAVEGASSDEDGQDANF
KRASNGDGGRKRRVVFDFSDEEEEFEDAVNLASPDPPKGKSCIVSKQSPKPLVPDKINLN
SDQQKQDKPKVKEEKSSNRESNLSPREDSSVLSKGKNNGISSSDKIAGGVPEIDVNKKDK
VTDAAPNSPKRRKVMKTRIDERGREVTEVVWEGEAETKKADSNETKKSENSIVTNAANRA
PPAKKSPAVGNTAPSNVTGKAGSKKAGNSKDPKQGNIMSFFKRV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggccgatatcgaaaccctaggtattctcgaagagatcgaagccctagtctccgataag
cttcaagtggtttcctacaagtggctgagtcgtagttttttggtgacatcaaatgtggca
aaaaggttgcttcatgagtttgttgaaaaacatggaggtgggttggaagtagtttatact
ttgtctggctggttgaagaatgatcctccagtttaccatataaggcttgtttctgaacct
aaacttgcagaagcaaaacaggaatttgatggccattgctcggttcaggtttatagtgtg
caagcttgcattccaaaggatccagctgcactttggaatgctgaatttgtgcaagcagaa
gagctttttaagcagcccttcgcagttgataattgcttgagagataacaggttctgtgga
atttccaattcttttgtcaagcgcattgctgagggagcacctgtcagcaatgtggcttca
cagcccaaaactacaggattgctgggtccatccaaaagcatttctgcacctcaaaccata
gctgttcaacagcctcaggaaagaaaagtacagcaatcaagcccaaaagtcagtttgcag
tctcccagtgtggtaacagatgtcaaagatgaaagtaatggcaccagagctcatgatcaa
gctagcaagcctcctgcagataaaggaaaagctcctccactgcctgctaataaaaagaaa
ggccagaatgataaaagttctggaactgaaggctcattggcaaatatgtgggggcgtgca
tctgtaaagtcaaagcccagttgtgccccagtggatgttgttagcgcagaagctcaaatt
tgtgctcgtgaagctgtagaaggtgcgagcagtgatgaagatggtcaagatgccaatttt
aagagagcctccaatggtgatggtggtagaaagaggagagttgtttttgatttctcagat
gaagaagaggagtttgaagatgcagtcaatttggcatcaccagatcctccaaaagggaaa
tcatgtatagtttcaaaacaaagtcctaaacctttggttcctgacaaaatcaatttgaat
tctgaccagcaaaaacaagataaaccaaaggtcaaggaagagaaatcatctaatagagaa
tctaacctatcaccaagggaagattcttcagttctcagcaaaggcaagaacaatgggatt
tcctcttcagacaagattgcaggtggagttcctgaaattgatgtaaataagaaggataaa
gtgacagatgctgctccaaattctcctaaaagaaggaaagtgatgaaaacacggatagat
gagcgtgggagagaagtaaccgaggtagtctgggagggtgaggcagagacgaagaaagct
gacagcaatgagacaaagaaatctgaaaatagtatagtcaccaatgcggctaacagggcc
cctcctgctaagaaatcgccagcagtgggaaacaccgccccttctaatgtaactggcaaa
gcaggaagcaagaaagcaggaaactcgaaagatcctaagcagggaaatattatgtcattc
ttcaagagggtttga
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