Vitis vinifera (wine grape): 100250597
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Entry
100250597 CDS
T01084
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vvi03036
]
100250597
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vvi04812
]
100250597
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
100250597
Microtubules and associated factors
gamma-tubulin ring complex
100250597
Cytoskeleton proteins [BR:
vvi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
100250597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_IFT122_1st
NYD-SP28_assoc
Motif
Other DBs
NCBI-GeneID:
100250597
NCBI-ProteinID:
XP_010664212
UniProt:
F6H0L5
LinkDB
All DBs
Position
18:join(2973406..2973571,2973927..2974039,2975616..2975876,2975976..2976080,2977207..2977272,2977421..2977642,2979586..2980161,2980869..2981474,2981746..2981925,2982012..2982119)
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AA seq
800 aa
AA seq
DB search
MATSHFADPSIAMLSTSGGDTVKLFDVSLGLGDPCTLSYSPSPGHHVYSVKWSHTNLVVA
SAGEDKKISLWRKNGQIIGTIPVFGSESGENIEESIFAINFSNKGSRYICSGGSGKVVRI
WDLRRRCCIKWLRGHTDVITGAMYNYKDEHLASISLNGVLILHNLASGAKVAELKDPNQQ
VLRVLDYSRISRHLLVTAGDDGSIHLWDTTGHSPKVSWLKQHSAPTAGVTFSPSNDKMIA
SVGLDKKLYTFDRGSRRPSFCIPYEMPFSSLAFRDDGWTLAAGTSHGQVVFYDVRGKPQP
FSILCAYGNSEAVTSLCWQRSKPVIVDESNCSPEIALMGGATEDSVIIPDPLPSVTSSSL
SLSMALPGSQNPGRIGPSTEASSLTVTSGGSMSSSLCLSMAEETPSRSHLRLGGTLAKLR
APHSGYTFKDDMEVFSPLVDVQPLTPTLDKLWDDHEGAKKDYLPFDKKPSSLFSSPSRRS
SIAEGEGNNHPIFNWKSNSTSRQDTHASLTAPGSSTTSSFKSEDSSITPPKAWGGERFSD
KFTHHRQPTLSRFGMLAASGLASGSMFSGLQELWSSTSHMSGSSSSNQNLTFGNLRAKDF
SFNQETPLGVPENFPSISVSLPLDTKAVTRQANLELPGSPASLTLPRRFSTYAERISTTL
SSSDGTSPVGSPKIKKTGAETRAEILNGLFNSVTSAASEAGTHPMGGTSLSQKGPSQSDT
QQGTSFTLQMFQSTLEETLDSFQKSIHKDMRNLHIEILRQFHIQETEISSVASSILENQA
ELMKEIQSLRKENQQLRQLL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgcattttgcagatccgtcaatagcgatgttatcgaccagcggaggtgac
accgtcaagcttttcgacgtctccttagggctgggcgacccctgcactctgagctactcg
ccttcaccgggtcaccatgtctattcagtcaagtggagtcacaccaatttggttgtggca
agtgctggagaagacaagaagatctctctatggcggaaaaacggacaaattatcggaact
attccagtttttgggagtgaaagcggagagaacatcgaggaatctatatttgctatcaat
tttagcaacaagggatccaggtacatatgttctgggggaagcggtaaagttgtaagaata
tgggatttgcggaggagatgttgcattaagtggttgaggggtcatactgatgtgataact
ggggcaatgtacaattacaaagatgagcacttggcttccattagtttaaatggggttctt
attctacacaaccttgcatctggtgcaaaggtggctgaactcaaggaccccaatcaacag
gtattaagagtgcttgattattcacgaattagtcgacaccttttggtgactgctggtgat
gatgggtcaatacatctgtgggatacaactggtcacagcccaaaggtttcttggttgaag
cagcactctgcaccaactgctggggttaccttctcaccctccaatgataagatgattgct
agtgtaggtctagataaaaagttgtatacttttgacagagggtccagaagaccttcattt
tgcattccttatgagatgccattctcttcattggcatttagagatgatggctggactcta
gcagctggaacaagtcatggccaagtggtattctatgatgtccgtggaaaaccacagcct
ttctccattctctgtgcttatggtaattcagaggctgtcacaagtttatgctggcaaaga
tcaaaacctgtaattgtagatgaaagtaattgcagccctgagattgctcttatgggaggt
gctaccgaagattcagtcattattcctgacccacttccgtctgtaacatcatcaagtctt
tcactatccatggcgttacctggttctcaaaatcctggccgcataggtccgtcaacagaa
gcatcttcacttactgtaaccagtggtggttctatgtcaagctcgctctgtttgtctatg
gcagaggaaacaccgagtagaagtcatctgcggctaggtggaacattggcaaaattacgt
gctcctcattctggttataccttcaaggacgatatggaggtgttttctcctctcgtggat
gttcaaccacttacacctacacttgataagctttgggatgatcatgaaggagcaaagaaa
gattatctaccttttgataagaagccttcgtctctgttttcttcacctagtaggagatcc
tctatagcagagggtgagggcaataatcatccaatattcaattggaaatccaattcaact
tccaggcaggacactcacgcttctcttacagcaccgggatcatctactacttcatctttc
aaaagtgaagactcttccatcactcctccaaaagcctggggtggtgagagattttctgat
aaatttacccaccaccgtcagcccacactgtctcgctttgggatgttggcagctagtggt
ctagcatcagggtcaatgttttctggattacaagagctatggtcatcaacaagtcatatg
agtgggagctcctcgtcaaatcaaaacctgacttttggaaatttgcgtgccaaagatttc
tcttttaatcaggaaactccactgggagtcccagaaaatttcccttctatttccgtatct
ctgcctctagatacaaaagctgtcaccagacaggctaaccttgaactgccaggatcacca
gcatccttgaccctcccacgaagattttccacttatgccgagagaataagcactacctta
tcctccagtgatgggacctctcctgttggttcaccaaaaataaagaaaacaggagctgaa
accagagcagaaattttgaatggcttatttaattctgttacatcagctgcctcagaagca
gggactcatccaatgggaggaacatcactatcccagaaaggtccttctcagtcagatacc
cagcagggaacctcatttacccttcagatgtttcaaagcacccttgaagaaacccttgat
tcctttcagaaatccatacacaaagatatgaggaaccttcacatcgaaattctgagacaa
tttcatattcaagagacagaaatctcaagtgtggcaagctcgattttggaaaaccaagct
gagctgatgaaagaaatccagtctctccggaaagagaatcagcaactccgccaattgctt
tga
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