Vitis vinifera (wine grape): 100250787
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Entry
100250787 CDS
T01084
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100250787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100250787
03036 Chromosome and associated proteins [BR:
vvi03036
]
100250787
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100250787
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100250787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WD40_RFWD3
RMC1_N
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
100250787
NCBI-ProteinID:
XP_002274315
UniProt:
D7TZH1
LinkDB
All DBs
Position
9:complement(join(10765876..10765923,10766005..10766085,10767422..10767493,10770148..10770225,10776746..10776874,10779874..10779954,10784412..10784553,10785648..10785841,10785928..10786005,10792236..10792322,10792780..10792827))
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AA seq
345 aa
AA seq
DB search
MSNFSAANPNPNKSIEVAQPPTDSVSSLKFSPKANFLVATSWDNQVRCWEITRDGATTGS
VPKASISHDQPVLCSAWKDDGTIVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWV
PEMNLLVTGSWDKTIKYWDTRQSNPVHTQQLPDRCYAFTVRHPLMVVGTADRNLIVFNLQ
NPQTEFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHREG
NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNNDGSIF
VYSVCYDWSKGAENHNPSTAKNHIFLHLPQESEVKGKPRVGTSRK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacttctcagctgccaatccaaatccaaacaaatccattgaggtggctcaacct
cctaccgattctgtttcaagccttaaattcagtcccaaggcaaatttcctggtggctacg
tcatgggataaccaggtacgatgttgggagataacaagggatggagctacaacaggcagt
gtacccaaggcatcaatatctcatgatcaaccagttttgtgctcggcttggaaggatgat
ggaacaattgtcttttctggaggctgtgacaagcaagtgaagatgtggcctttgctgtct
ggtggtcaaccagttactgtggccatgcatgatgctcctataaaagaggttgcttgggtt
ccagagatgaacctcttggtcacaggaagctgggacaagaccattaagtattgggacaca
aggcagtcaaatccagtgcatactcaacaactccctgatcgctgttatgcttttaccgtg
agacatcctctgatggttgttggcactgctgatagaaatttgatagtttttaacttgcag
aaccctcagaccgagtttaagagaatcacttcacccctgaagtatcagacaagatgtgtt
gcagcatttcctgatcagcaaggtttcttagttggttcaattgagggaagagttggcgta
caccatctggatgatgcacaacaaagtaaaaactttacttttaaatgtcatcgagaggga
aatgagatatactcagttaactcattaaactttcatccagtgcatcatacatttgcaact
gcagggtctgatggtgcttttaatttttgggacaaggatagtaaacagagacttaaggcg
atgtcaaggtgcagccaacctataccttgcagtgctttcaacaatgatggctcaatattt
gtgtattcagtgtgctatgactggagtaagggtgcagaaaaccataacccatcaacagcg
aagaaccatatttttctacacctgccacaggagtctgaggttaaaggcaagccacgtgtt
ggaacaagtagaaagtga
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