Vitis vinifera (wine grape): 100251031
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Entry
100251031 CDS
T01084
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100251031
Spliceosome [BR:
vvi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100251031
Other components
Complex C specific factors
100251031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
100251031
NCBI-ProteinID:
XP_010662048
UniProt:
F6HE87
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Position
16:complement(349023..351614)
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AA seq
863 aa
AA seq
DB search
MDEYQEMESFGMDNDFEDGQWINGEFYYRKRRDKRHQTKDDVLYGVFADSDSDDSSSAKK
RRKDLSNKTDFTKPVNFVSTGVVMPTQEIERNSREQVNEDDGGSGGDRPGLGLGSTNFGS
GIGFTSNSGSFSKNVGNNEVDEHDNDDDGFLPTAFGRKIKEGAQRREREREKSKLVKKSQ
GGRREAELGDVGRFEKFTKGIGMKLMEKMGYTGGGLGKNEQGIVAPIEAKLRPKNMGMGF
NDYKETKLPALQEPEEKKSLPGTTQAVNKSKGKLWTKQASGKKKDRYITAEELLVKKQEQ
GIEVVQKVFDMRGPQVRVLTNLEDLNAEEKARENDIPMPELQHNVKLIVNLAELDIQKLD
RDLRNERETVVSLQMEKEKLQKEAAHQKTQLDNTEQIVSVLDIISEENSVGKLTLDSLAK
YFGDLRRRFAEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPLHGLEVMSSWKNLLQGG
DDIFDLSDVGSPYTQLVMEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLQTM
LDNIVLPKLSSAVDVWDPRRETVPIHVWVHPWLPLLGQKLESLYWKICDKLGNALQAWHP
SDGSAYTILSPWKTVFDSTSWERLMVRSIIPKLMNVLQEFQVNPASQNLDQFHWVMSWAS
VIPIHRMVELLELHFFPKWQQVLYHWLCSGPNFEEVTQWYLGWKGLLPQELLANEQIRYQ
LNIGLDMMNQAVEGMEVVQPGLRENISYLRVLEQRQFEAQQKAAADARQQAAASLGGTTQ
MDGIGGVLEMSLKEVIEAHAQQHELLFKPKPGRMYNGHQIYGFGNISIIVDSLNQKVFAQ
HEERWSLVTLEQLLEMHKNSILK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcaagagatggagagctttggcatggacaacgacttcgaagacggtcaa
tggatcaacggcgaattctactaccgtaagcgcagggacaagcgccaccagaccaaagac
gacgtcctctatggtgtattcgccgactccgattccgacgactcttcctctgccaagaag
cgccgtaaggacctctccaacaagaccgatttcaccaagcccgtcaatttcgtctccacc
ggcgtcgtcatgcccacccaagaaatcgaacgtaattccagggagcaagtcaacgaagac
gacggcggcagcggcggcgacaggcccggtttgggcctcggttctaccaatttcggttca
ggtataggctttacttccaattccggttcgttttcgaaaaatgttggcaataacgaagta
gatgaacatgataacgatgatgatggtttccttcccactgcgttcggaaggaagattaag
gagggtgcccagcggcgggagagagagagggagaagtcgaaattagttaagaaatctcaa
ggagggagaagagaggctgaattgggggatgtcggacgatttgagaagtttacgaaaggg
attgggatgaaattgatggagaaaatgggttacacaggaggtggtctggggaaaaatgag
caagggattgttgctccgattgaggctaagttacgacccaagaatatggggatgggtttt
aacgattacaaggagacgaaattgcctgcattgcaagaacctgaggagaagaaatcgttg
cctgggaccacgcaggctgtgaataagagtaaagggaagctctggacgaagcaagccagc
gggaagaaaaaggacagatacattacagctgaggagttgcttgtgaagaagcaagagcag
ggtattgaagttgttcagaaggtgtttgacatgagggggccccaggttcgcgttttgacg
aatctggaggatttgaatgctgaggagaaagccagggaaaatgatataccaatgcctgaa
cttcagcataatgtgaagttgattgtgaacttagctgagcttgatatacagaagttggac
agggatttgaggaatgagagagagacagtggtgagcttgcagatggagaaggagaagtta
caaaaagaggcagctcatcagaagacacagttggataatacagaacaaatagttagtgta
ttggacataataagtgaggagaattcagtaggaaaattgacattggattcacttgcaaag
tattttggtgatttacgaaggagatttgccgaagattacaaactttgtaatctgtcatgc
attgcttgctcatttgctctccctttacttattagagtgttccagggatgggatcccctt
caaaatccattgcatggcttggaagtgatgtcctcatggaaaaatctattgcaaggaggg
gacgatatttttgatctctctgatgtgggatcaccttatacacagttggttatggaagtt
gttttacctgctgtaagaatatctggaatcaacacttggcaagccagggaccctgaaccg
atgcttcgctttttggagtcatgggaaaaattgcttccttcctcagtccttcaaaccatg
cttgacaacattgttttgcctaaattatcttctgctgtagatgtgtgggacccacgtagg
gaaaccgttccaatccatgtttgggtgcatccatggctaccactgttgggtcagaagttg
gagagtttatattggaagatatgtgataaattgggcaatgctcttcaagcatggcatcct
agtgatgggtctgcttacactatcctgtcaccttggaagacagtttttgactctacaagt
tgggagagacttatggttcgatcaataattccgaaattgatgaatgtcctgcaagaattt
caagtaaacccagcaagtcagaacctcgatcagttccattgggtcatgtcttgggcttct
gtaattccaattcatcgcatggttgaattgttggaacttcatttcttcccaaagtggcag
caggttttgtaccattggttgtgttcaggcccaaactttgaagaggttacacaatggtat
ttgggttggaagggactcttgccccaagaacttcttgccaatgaacagatccgctatcag
cttaatattggtcttgacatgatgaaccaggctgttgaaggtatggaggtggtccaacct
ggtttgcgagagaacattagctatcttcgggtgcttgaacaacggcagtttgaggctcag
cagaaagcagctgcagatgctcgacagcaagctgccgcgagtctgggtggcacaacccag
atggatggcattggaggtgtgcttgagatgagtttgaaagaagttattgaggcacatgca
caacagcatgaattgctgtttaagcctaaacctggcagaatgtataatggtcaccagata
tatggctttggtaacataagcataatagtggactctctaaatcaaaaggtatttgcccaa
catgaagaaagatggtccttggtaaccctggagcagttgctggagatgcacaagaattct
attttgaagtga
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