Vitis vinifera (wine grape): 100251079
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Entry
100251079 CDS
T01084
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100251079
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100251079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_STOP2_3rd
Motif
Other DBs
NCBI-GeneID:
100251079
NCBI-ProteinID:
XP_002268279
UniProt:
A0ABY9BFN6
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Position
1:complement(join(23790508..23791771,23793165..23793561,23793759..23793909))
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AA seq
603 aa
AA seq
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MAASSTPAQLFGIREEEQNQVKQQHSAVPSSSNAPAAAPPKKKRNQPGTPNPDAEVIALS
PKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVRRKVYLCPEPGCVH
HDPARALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTL
FSRRDSFITHRAFCDALAQESARHPTPMSTIGSHLYGSSNMGLGLSQVGPQISSMPDQSH
QPGDMLRLGGARAGQFDHLIPPAIGSSSFRTPQPMPSQAFYIPEPNQEFHEDQQSQHGGL
LTNKPFHGLVHLPDLQNNTNNPSSAANLFNLSFFSNSSNTNSMLSNTNNANNSTNMPSSG
LLISDQFNTVNGGSGSERNNLFPSNIIGDQISSGVPSLFSTSLQNENAVSHMSATALLQK
AAQMGSTSSNNSASLLRGFAGSSSANAKSDRPLVGPNFGGVFGENESHLQDLMNSLGGGS
SSIFGGGSGGVNAYSGHENENTYGGFNANRSTLEQQQQQQQQHRHGPNFCNIDEIKLHQN
LTANMGGSDRLTRDFLGVGQMVRTISGGFSQRDLPPPGINISTLDSERSSAQTSQAFGGG
NFQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcttcaacgcctgcgcagttgtttggaatcagagaggaggagcagaatcag
gtgaaacaacaacattccgccgtgccatcctcatcgaacgccccagctgcagcccccccg
aagaagaagagaaatcaacctggaactccaaatccagatgcagaggtcattgcactctct
ccaaagaccctaatggccacaaatagatttatatgtgaggtgtgtaacaaggggttccaa
agggagcaaaacttacagctccacagaagaggacacaacctaccctggaagcttaagcag
aagacaacaaaagaagtgagaaggaaggtgtatttgtgtccggaacctggttgcgttcac
catgacccggctcgggctcttggcgacctcactggtataaagaagcactactcaaggaag
catggagaaaagaaatggaagtgtgagaagtgctctaagaggtatgccgttcaatcagat
tggaaagcccattccaagacctgtggcacgagagaatacagatgtgattgtggtaccctc
ttctcaaggcgtgacagcttcattactcacagggccttctgcgatgcgctcgcgcaggaa
agtgcaagacatccgacgccaatgagcacaattggcagtcatctctatggaagtagtaac
atggggttaggcttgtctcaggtgggtccccaaatttcatccatgccagatcagagccac
caacctggtgacatgcttcgacttggaggtgcccgggctgggcaattcgaccatctgatt
ccacctgcgattggttcgtcatccttccgaacgccgcagcccatgccttctcaagccttc
tacattcctgagccaaaccaggaatttcatgaagaccagcaatctcaacatggggggttg
ttgacgaacaagccattccatggactggttcatcttcctgatctgcaaaacaacacaaac
aacccttcttctgctgctaatctgttcaatctcagcttcttttccaacagcagcaatacc
aacagcatgctcagtaacaccaacaatgccaataacagcactaatatgccatcttcaggg
ttgttgatttctgaccagttcaacactgtaaatggaggtagtggtagcgaaaggaataat
ctcttcccaagtaacataatcggggatcaaatcagctctggggtcccttctctcttcagc
acatctctccaaaatgaaaatgcagtttcgcatatgtctgcaactgcattgcttcagaaa
gcggcacaaatgggatcgacctcgagcaacaacagtgcctccttgctccgaggctttgca
ggttcttcctccgccaacgcaaaatctgataggcctcttgttggccccaacttcgggggt
gtttttggggaaaacgaaagccaccttcaggacctgatgaattctcttggtggtgggagc
tcgtccatctttggtggtgggtctggaggggtgaatgcatatagtggacatgagaatgag
aacacctatggaggattcaatgcaaataggtctactctggaacaacaacagcaacagcag
cagcagcatcgccatggcccaaacttttgcaacatagatgaaatcaagctccaccagaat
ctgactgctaatatggggggctctgatagactaaccagagattttctaggggtggggcag
atggttagaaccatcagtggaggattttcacagagagacctaccacctcctggtattaat
atcagcaccttggattcagagagaagcagtgcacagacaagccaagcttttggtggtggg
aattttcagtga
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