| Entry |
|
|---|
| Name |
(RefSeq) DNA (cytosine-5)-methyltransferase 1
|
|---|
| KO |
|
|---|
| Organism |
vvi Vitis vinifera (wine grape)
|
|---|
| Pathway |
| vvi00270 | Cysteine and methionine metabolism |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:vvi00001]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
100251127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:vvi03000]
100251127
03032 DNA replication proteins [BR:vvi03032]
100251127
03036 Chromosome and associated proteins [BR:vvi03036]
100251127
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:vvi02048]
100251127
Enzymes [BR:vvi01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
100251127
Transcription factors [BR:vvi03000]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100251127
DNA replication proteins [BR:vvi03032]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
100251127
Chromosome and associated proteins [BR:vvi03036]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100251127
Prokaryotic defense system [BR:vvi02048]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
100251127
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
7:complement(join(31342239..31342379,31343063..31343281,31343395..31343556,31343647..31343925,31344018..31344215,31344319..31344466,31344553..31344664,31344776..31344977,31345141..31345305,31345518..31347027,31347407..31348889,31351034..31351064))
|
|---|
| AA seq |
1549 aa
MGSAALLDSKGMKKNKAKLKSVAPSTKKTAAIGQKGKKRNVSQSSEQPVGSRKMPKRAAA
CTDFKERSVRISEISATIETKRDQLVYEEVVAVHLTSEQHEDHPNRRLTDFILHDSDGQP
QPFEMSEVDDLLISGLILPLEESSDKEKQKGVRCEGFGRIESWAISGYEDGSPVIWVSTD
VADYDCVKPASSYKNFYDHFFEKARACVEVFRKLSKSSGGNPDLSLDELLASVVRSMSAS
RCFSGGGSIKDFIISQGEFIYNQLIGLEATSNQSDQIFAELPVLVALRDEGCKRGDFMKA
KGGSSGGSSMSGLRIRDIGNEADESFEENDDVKLARLLQEEEYWQSIKQKKSQGSAPLSN
KYYIKINEDEIANDYPLPAYYKTSNQETDEFLVFDSDIYMCDTDELPRSMLHNWSLYNSD
SRLISLELLPMKPCADIDVTIFGSGVVTADDGSGFCLDTDLGHSSSGQGPQEVDGIPIYL
SAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYAPWYEPVLKTARLAISIITLLKEQS
RIARLSFADVIKRVSEFKKDHPAYISSNPAAVERYVVVHGQIILQQFAEFPDENIKRSAF
VIGLAKKMEERHHTKWVVKKRKVVHKSEPNMNPRAAMAPVISKRKVMQATTTRMINRIWG
EYYSNYSPEDSKEGASCIEKEEEEVEEQEENEEDDAEEEELLGSEKTQRPCSLSRQSKLH
STNKEIRWDGEFVGKTRNGESLYKQAIVCGDKIAVGDTVLVEVDESDELTITYFVEYMFE
SLDGRKMFHGRMMQHGSQTVLGNTANERELFTTNECVEFELQDIKQTVLVEIRRRPWGHQ
HRKENANFDKIDKASAEERKRKGLPIEYYCKSLYWPERGAFFSLPFDTMGLGTGFCHSCE
IKESQKEKDSFKVNSCKTSFVYKGTEYSVNDFVYVSPQHFAAERAETGTFKAGRNVGLKA
YVVCQMLEIVVPKVPKIAETKSIQVQVRRFFRPEDISAEKAYCSDIREVYYSEETHSVPV
ETIEGKCEVMKKHDLPPCDVPAIFDHVFFCERLYDPSKGCLKQLPAHIKLRYSARKEVDD
AAARKKKGKAKEGENDLEVERQIDAFHENRLATLDIFAGCGGLSEGLQQSGVSVTKWAIE
YEEPAGDAFKLNHPESLMFINNCNVILRAVMEKCGDDDDCISTSEAAELAAALGEKDINN
LPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPKFFLLENVRN
FVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPEWPEP
MHVFAVPELKITLSENMQYAAVRSTATGAPFRAITVRDTIGDLPDVKNGASITNLEYQND
PVSWFQKKIRGNMVVLMDHISKEMNELNLIRCQKIPKQPGADWHSLPDEKVKLSTGQLVD
LIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPEQDRILSVRECA
RSQGFRDSYQFAGNIQHKHRQIGNAVPPPLSFALGRKLKEAVDSKRSIL |
|---|
| NT seq |
4650 nt +upstreamnt +downstreamnt
atggggtctgctgctctattagactcgaaaggaatgaagaagaacaaagctaaactaaaa
tctgtggctccgagtactaaaaagacagcagcaataggacaaaaaggaaagaagcgaaat
gtgtctcagagcagtgaacagcctgttggttctcgaaaaatgccaaagagagctgctgca
tgtacagatttcaaggagagatctgttcgcatatcggaaatatctgctactattgaaaca
aaaagggatcaacttgtatatgaagaggttgtagctgtacacctgacttccgaacaacat
gaggatcatccaaatagaaggctcacagatttcatactccatgattcagatggacagccc
cagccttttgagatgtctgaagttgatgacttgttaatctcaggcctcatattgcctctt
gaggagagttcagacaaggagaagcagaagggtgtcagatgtgaaggctttggccgaata
gagtcatgggcgatctctggttatgaagacggatctccagtgatatgggtgtccactgat
gttgctgattacgattgtgttaaacctgccagtagttataagaatttttatgatcatttc
tttgaaaaggctcgtgcttgtgttgaagtttttagaaaactgtcaaaatcttctggggga
aaccccgacttaagtcttgatgagctccttgctagtgttgttcgctcaatgagtgcaagc
aggtgcttctctggtgggggatcaatcaaagactttattatttcgcaaggtgagtttatt
tacaaccagttgataggtttggaagcaacatccaatcagagtgatcagatatttgcagag
ttgcctgtccttgtggcccttagagatgaaggttgtaaaagaggggattttatgaaagca
aaaggaggttcctcaggtggcagctcaatgagtggcttgagaattagagatataggaaat
gaagcagatgaatcttttgaggaaaatgatgatgtgaaattggcaagattgttgcaggag
gaagagtactggcaatcaatcaaacagaagaaaagtcagggttcagctcctttgtcgaat
aaatactacatcaaaataaatgaagatgagattgctaatgactacccgttacctgcatac
tacaagacatctaatcaagaaactgatgagttcttagtctttgacagtgacatctatatg
tgtgacacagatgaacttcctcgaagcatgctccataattggtccctttataactcagac
tcgaggttgatatcattggagcttcttccgatgaaaccatgtgcagatattgatgtcacc
atctttggatcaggggttgtgactgctgatgatggaagtggattctgtcttgacactgat
cttggtcattcatctagtggtcagggaccacaggaagttgatgggatcccaatttatttg
agtgcaattaaggagtggatgattgagtttggatcctcaatggttttcatttcaatccgc
acagacatggcctggtataggcttgggaagccctcaaagcagtatgctccgtggtatgaa
ccggttctgaaaacagcaaggctcgcaataagcataattacacttctgaaggagcagagt
cgcattgctaggctttcttttgcagatgttatcaagagagtatctgagttcaagaaggac
catcctgcatacatttcctctaatcctgcagctgtggaaagatatgtggttgtccatgga
caaattatactgcagcagtttgctgaatttccagatgagaatattaagaggtctgcattt
gtgattggtcttgcaaagaaaatggaggagagacatcataccaaatgggtggttaagaag
aggaaggttgtgcacaagagtgagccaaacatgaacccaagagcagcaatggcacctgtg
atatcaaagaggaaggttatgcaagctacaacaacaagaatgatcaacagaatttggggg
gagtattattcaaattactcacctgaagattcaaaagagggagctagttgtatagagaaa
gaggaggaagaagttgaggagcaagaagaaaatgaagaggatgatgcagaagaagaggaa
ttattaggttcagagaaaacccagaggccttgttcattgtctagacaaagtaaattgcac
tccacaaacaaggaaataaggtgggatggggaatttgtaggaaaaacccgtaatggtgag
agtctctacaaacaagccattgtttgtggtgacaagattgctgtgggagatactgttttg
gtggaagttgatgaatcagatgaacttactatcacctattttgtggaatacatgtttgaa
tctctggatggaagaaaaatgtttcatggaagaatgatgcagcatgggtctcagactgtt
cttgggaacactgctaatgagagggaattgtttacgacaaatgagtgtgtggaatttgaa
ttgcaggatattaagcaaacagttcttgtagagatacgaaggaggccttggggacatcag
cacaggaaagaaaatgctaattttgataaaattgataaagcaagtgcagaagagagaaaa
aggaaaggattgccgattgaatattactgcaaaagcttatattggccagaaagaggtgct
ttcttcagtctcccctttgatactatgggtcttgggacaggtttctgtcactcttgtgaa
ataaaggaatcccagaaggagaaggattcttttaaagtgaattcttgtaaaaccagtttt
gtatacaagggaactgaatactccgtcaatgactttgtttatgtaagcccccagcatttt
gctgctgaaagggcagagactggaactttcaaggctgggagaaatgtaggattgaaggct
tatgttgtgtgtcaaatgctagagattgttgttccaaaggtacccaaaatagctgaaacg
aaatctatccaggtccaagtgagaagatttttcaggcctgaggatatttcagcagaaaaa
gcatattgttctgatatccgagaggtgtactacagtgaggaaacacattctgtgcctgtt
gagactatagaaggaaaatgtgaggtcatgaagaagcatgatctgcccccatgtgacgta
cctgcaattttcgaccatgttttcttctgtgagcgtctatatgatccttctaaagggtgc
ctcaaacagttgccagctcacattaaactgaggtactcagctagaaaggaggttgatgat
gctgcagcaagaaagaaaaagggcaaggctaaagaaggagagaatgatttggaagttgaa
agacaaatagatgcatttcatgagaaccgtttagccactctagatatttttgctggttgt
ggtggcttatcagagggattgcagcaatctggtgtgtcagtaaccaagtgggctattgaa
tatgaagagcctgctggagatgcatttaaactcaatcatccagaatcgttgatgtttatt
aacaattgcaatgtgattctcagggctgtcatggagaaatgtggggatgatgatgactgt
atctcaacttctgaggctgccgagttagctgcagcactaggtgagaaggacattaataat
ttgcccctgccaggacaagtagattttatcaatggggggcctccatgtcagggcttctct
gggatgaaccggtttaatcaaagtacctggagtaaagttcagtgtgaaatgatcttggca
ttcttgtcctttgctgattactttagaccaaaatttttcctccttgagaatgtgagaaac
tttgtgtctttcaacaaaggacagacattccgtctaactctagcttcacttcttgaaatg
ggctatcaggtgagatttggtatcttggaagccggagcatatggagtttctcagtcccgg
aaacgagcatttatatgggcagcctccccagaagagactctccctgaatggccagagcct
atgcatgtctttgctgttccagaattgaaaatcactttgtcggaaaatatgcagtatgct
gctgttcggagcactgcaactggagctccttttcgtgcaataaccgttagagatacaata
ggggatctcccagacgttaaaaatggggcatctataacaaatctagagtatcaaaatgat
cctgtctcatggttccaaaagaaaattcggggtaacatggtggtcttgatggatcacata
tcgaaagaaatgaatgagcttaatctcattcgatgccagaaaattccaaagcagccaggt
gctgactggcatagtcttccagatgaaaaggttaaactgtctactgggcaattggttgac
ttgataccatggtgcttgccaaacacagcaaagaggcacaatcagtggaagggactgttt
ggaaggctggattgggaggggaattttccaacttccatcacagaccctcaaccaatgggt
aaggtgggaatgtgttttcatccggagcaggataggattctttctgttcgtgaatgtgct
cgatctcaaggttttcgggatagctatcaatttgctggtaacattcaacacaagcacagg
cagattggaaatgccgttcctcctcctctatcatttgcactgggaaggaaactcaaagaa
gcagtggacagcaagaggtccatcttgtga |
|---|
