Vitis vinifera (wine grape): 100251231
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Entry
100251231 CDS
T01084
Name
(RefSeq) probable pectate lyase 13-like precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100251231
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100251231
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100251231
NCBI-ProteinID:
NP_001267999
UniProt:
E7BTN3
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Position
13:join(6676378..6676499,6676577..6677420,6677512..6677717,6677821..6678280)
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AA seq
543 aa
AA seq
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MLRNTHIVFICLLGCLCPVITATDLPHQHPNPEAVVLQVQRRLNASLARRGLLGVHENDQ
VSCLTGNPIDDCWRCDPNWEADRQHLAECGIGFGQQAVGGKGGQVYVVTDHSDSGNPGSL
RYAVTKPEPLWIIFSSDMLIKLKRELIVNSYKTIDGRGANVQITGGGCIGLKYVTNVIIH
NIQLHHCVPSESDGDGISIMGSRYIWIDHCSLSYCKDGLIDATLGSTAITLSNNYFSHHD
KVMLLGRSDGDEMDDGMQVTVAFNRFGEALEQRMPRCRRGYFHVVNNDYTQWGIYAIGGS
ASPTINSQGNRYTAPPSTNAKEVTRRMDAKDGDWARWNWRTEGDIMVNGAYFVPSGDGLG
AQFAMASSVEPKSAGFIDQLTVNAGALPPTSVVGGIPNGQVPNSIPNSQVPNGVPNDPVP
NVGGTNGDNGGLGSYSGGAGANSGYAGGGAASGSNYGDGGGAAAAGANPGYAGGGAASGS
NYGDGGGAAASGSNYGDWNFFGMTHGSGAPRLPPPSTTSVLSAPFVTLFLYFIINYGCSI
LPL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaacacccacattgtctttatatgccttctgggctgcctctgccccgttata
acagccactgatctcccccatcaacaccccaatcctgaagctgtggttctacaagttcaa
aggagactgaatgcgtctcttgcaaggaggggcttactgggtgtccatgaaaatgaccag
gtttcatgtctcaccggcaaccccatcgatgactgttggaggtgcgaccccaattgggag
gctgatcgccaacatctggccgaatgtgggattgggttcggtcagcaagcagttggtggc
aaaggtggtcaagtctatgtggtcactgaccactccgactcagggaatccgggttcgctc
cgatacgctgtcaccaaacccgagccactttggattattttctccagtgatatgctgata
aaactcaagagagagcttatagtaaacagctacaagactatcgatggacgaggcgcaaat
gttcaaatcacgggcggtggctgcattggcctcaaatacgttacaaatgttatcatacac
aacattcagcttcatcattgtgtcccctcggaatcggacggtgatgggatatccatcatg
gggtcaaggtacatctggatagaccactgctccctctcctattgcaaggatggcctgatc
gatgccacattgggttccaccgccatcaccctatcaaacaactacttctcgcatcatgac
aaagtgatgctcctgggtcgaagcgacggcgacgagatggatgatgggatgcaagtgacg
gtggccttcaatcgcttcggtgaggcgctggagcagaggatgccaaggtgccggcggggg
tacttccacgtggtgaataacgattacacgcaatgggggatttatgccattggcggcagc
gcaagccctactattaatagccaaggcaaccgttacacagcaccaccgtccacaaatgcc
aaggaggtgacgaggcgtatggatgcaaaagatggagattgggcacgttggaattggaga
acagagggagacataatggtcaacggcgcatactttgtgccctctggcgatggtttgggt
gctcagtttgctatggcttctagcgtggagcccaaatctgcaggcttcattgatcaactc
accatgaatgccggtgcccttcctcccaccagtgtagttggaagcataccaaatggtcaa
gtacccaatagcataccgaatagtcaagtacccaatggcgtaccaaatgatccagtaccc
aatgttggcggaactaacggggataatggtggtctagggtcctacagtggtggtgctggg
gctaattccggttatgctggtggtggtgctgcttctgggtccaattatggtgatggtggt
ggtgctgctgctgctggggctaatcccggttatgctggtggtggtgctgcttctgggtcc
aattatggtgatggtggtggtgctgctgcttctgggtccaattatggtgattggaatttc
tttggaatgacacatgggagcggtgcaccgcggctgccacctccatcaaccacctccgtt
ctttcagctccttttgttactttattcctgtactttattatcaactatggttgttgtata
ttaccattgtaa
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